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Figure 1.
Inhibitory effects of compounds from AGE against SARS-CoV-2 Mpro. (1 = glycyrrhizic acid, 2 = theaflavin 3,3'-digallate, 7 = oleanic acid, and 8 = benzyl (3-fluoro-4-morpholine-4-yl phenyl) carbamate).
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Figure 2.
IC50 of theaflavin 3,3'-digallate and ebselen for AGE against SARS-CoV-2 Mpro.
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Ligand Binding energy 1R4L 6LU7 Sum Glycyrrhizic acid −9.6 −9.3 −18.9 Theaflavin 3,3'-digallate −8.3 −10 −18.3 Agnuside −9.6 −8 −17.6 Fenflumizole −9.5 −7.7 −17.2 Angelicide −9.7 −7.1 −16.8 Sageone −9 −7.8 −16.8 Oleanic acid −9.4 −7.3 −16.7 Benzyl (3-fluoro-4-morpholine-4-yl phenyl)
carbamate−9.4 −7.1 −16.5 Glycerol ester of rosin −9.4 −6.9 −16.3 Endere S −9.4 −6.8 −16.2 Table 1.
Top 10 flavor agents docking results.
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Ligand Key residues 1R4L 6LU7 Glycyrrhizic acid Arg273, His345, Ala348, Thr365, Arg518 Phe140, Gly143, His163, Gln189 Theaflavin 3,3'-digallate Asn149, Asn154, Arg273, Asn277, His345, Lys363, Thr365, Arg518 Ser46, Tyr54, Phe140, Ser144, Cys145, Gly143, His163, Glu166, Gln189, Thr190 Agnuside His345, Thr371, Glu406, Arg518 Thr24, Thr45, Leu141, Gly143, Ser144, Cys145, Glu166 Fenflumizole His345 None Angelicide None Gly143, Ser144, Cys145 Sageone Arg273, His345 Gly143, Ser144, Cys145 Oleanic acid Glu406 none Benzyl (3-fluoro-4-morpholine-4-yl phenyl) carbamate Arg273, His345, Thr445, Tyr515 Gly143, Ser144, Cys145, His163 Glycerol ester of rosin Arg273, His374, Arg518 Gly143, His163 Endere S Arg273, Arg518 Gly143, His163 Table 2.
Key residues for the inhibitor binding.
Figures
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Tables
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