Identification of alfalfa lncRNAs based on PacBio sequencing

Figures (6) Tables (1)

Figure 1.
Length distribution of CCS, FLNC and NFL. Circular consensus sequences (CCS); Full length non-chimeric reads (FLNC); Non-full length reads (NFL).
Figure 2.
Length distribution of lncRNAs identified from PacBio sequencing.
Figure 3.
Length distribution of lncRNAs identified from short read RNA-seq data.
Figure 4.
Venn diagram of alfalfa lncRNA homologies in chloroplast genomes of Arabidopsis (AtC), rice (OsC), oats (AsC), M. truncatula (MtC) and alfalfa (MsC), respectively.
Figure 5.
Network of miRNAs and their target lncRNAs.
Figure 6.
The correlation between the length of lncRNA and the quantity of small open read frames (sORFs).

Terms	Number
Reads of insert	1,089,299
5' prime reads	533,904
3' prime reads	569,127
Poly-A reads	549,977
Filtered short reads	665
Non-full-length reads	687,477
Full-length reads	401,157
Full-length non-chimeric reads	391,677
Average length of full-length non-chimeric reads	2,300.8

Table 1.

Summary of reads from PacBio full-length sequencing.