[1]

Oda K, Yamato K, Ohta E, Nakamura Y, Takemura M, et al. 1992. Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA: A primitive form of plant mitochondrial genome. Journal of Molecular Biology 223:1−7

doi: 10.1016/0022-2836(92)90708-R
[2]

Alverson AJ, Wei X, Rice DW, Stern DB, Barry K, et al. 2010. Insights into the evolution of mitochondrial genome size from complete sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae). Molecular Biology and Evolution 27:1436−48

doi: 10.1093/molbev/msq029
[3]

Alverson AJ, Rice DW, Dickinson S, Barry K, Palmer JD. 2011. Origins and recombination of the bacterial-sized multichromosomal mitochondrial genome of cucumber. The Plant Cell 23:2499−513

doi: 10.1105/tpc.111.087189
[4]

Ward BL, Anderson RS, Bendich AJ. 1981. The mitochondrial genome is large and variable in a family of plants (Cucurbitaceae). Cell 25:793−803

doi: 10.1016/0092-8674(81)90187-2
[5]

Rodríguez-Moreno L, González VM, Benjak A, Martí MC, Puigdomènech P, et al. 2011. Determination of the melon chloroplast and mitochondrial genome sequences reveals that the largest reported mitochondrial genome in plants contains a significant amount of DNA having a nuclear origin. BMC Genomics 12:424

doi: 10.1186/1471-2164-12-424
[6]

Ding Z, Cui H, Zhu Q, Wu Y, Zhang T, et al. 2020. Complete sequence of mitochondrial genome of Cucumis melo L. Mitochondrial DNA Part B 5:3176−77

doi: 10.1080/23802359.2020.1808543
[7]

Sloan DB, Alverson AJ, Chuckalovcak JP, Wu M, McCauley DE, et al. 2012. Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates. PLoS Biology 10:e1001241

doi: 10.1371/journal.pbio.1001241
[8]

Covello PS, Gray MW. 1989. RNA editing in plant mitochondria. Nature 341:662−66

doi: 10.1038/341662a0
[9]

Liu YJ, Xiu ZH, Meeley R, Tan BC. 2013. Empty pericarp5 encodes a pentatricopeptide repeat protein that is required for mitochondrial RNA editing and seed development in maize. The Plant Cell 25:868−83

doi: 10.1105/tpc.112.106781
[10]

Rüdinger M, Funk HT, Rensing SA, Maier UG, Knoop V. 2009. RNA editing: only eleven sites are present in the Physcomitrella patens mitochondrial transcriptome and a universal nomenclature proposal. Molecular Genetics and Genomics 281:473−81

doi: 10.1007/s00438-009-0424-z
[11]

Giegé P, Brennicke A. 1999. RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs. PNAS 96:15324−29

doi: 10.1073/pnas.96.26.15324
[12]

He P, Xiao G, Liu H, Zhang L, Zhao L, Tang M, et al. 2018. Two pivotal RNA editing sites in the mitochondrial atp1 mRNA are required for ATP synthase to produce sufficient ATP for cotton fiber cell elongation. New Phytologist 218:167−82

doi: 10.1111/nph.14999
[13]

Lu MZ, Szmidt AE, Wang XR. 1998. RNA editing in gymnosperms and its impact on the evolution of the mitochondrial coxI gene. Plant Molecular Biology 37:225−34

[14]

Yang Y, Zhu G, Li R, Yan S, Fu D, et al. 2017. The RNA editing factor SlORRM4 is required for normal fruit ripening in tomato. Plant Physiology 175:1690−1702

doi: 10.1104/pp.17.01265
[15]

Xie H, Chen G, Li S, Tan Y. 2005. Advances in mitochondrial RNA editing. Crop Research 5:404−8

[16]

Kurtz S, Choudhuri JV, Ohlebusch E, Schleiermacher C, Stoye J, et al. 2001. REPuter: the manifold applications of repeat analysis on a genomic scale. Nucleic Acids Research 29:4633−42

doi: 10.1093/nar/29.22.4633
[17]

Warburton PE, Giordano J, Cheung F, Gelfand Y, Benson G. 2004. Inverted repeat structure of the human genome: the X-chromosome contains a preponderance of large, highly homologous inverted repeats that contain testes genes. Genome Research 14:1861−69

doi: 10.1101/gr.2542904
[18]

Thiel T, Michalek W, Varshney RK, Graner A. 2003. Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.). Theoretical and Applied Genetics 106(3):411−22

doi: 10.1007/s00122-002-1031-0
[19]

Sullivan MJ, Petty NK, Beatson SA. 2011. Easyfig: a genome comparison visualizer. Bioinformatics 27:1009−10

doi: 10.1093/bioinformatics/btr039
[20]

Voorrips RE. 2002. MapChart: Software for the graphical presentation of linkage maps and QTLs. The Journal of Heredity 93:77−78

doi: 10.1093/jhered/93.1.77
[21]

Mower JP. 2005. PREP-Mt: predictive RNA editor for plant mitochondrial genes. BMC Bioinformatics 6:96

doi: 10.1186/1471-2105-6-96
[22]

Ogihara Y, Yamazaki Y, Murai K, Kanno A, Terachi T, et al. 2005. Structural dynamics of cereal mitochondrial genomes as revealed by complete nucleotide sequencing of the wheat mitochondrial genome. Nucleic Acids Research 33:6235−50

doi: 10.1093/nar/gki925
[23]

Handa H. 2003. The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L.): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana. Nucleic Acids Research 31:5907−5916

doi: 10.1093/nar/gkg795
[24]

Christensen AC. 2013. Plant mitochondrial genome evolution can be explained by DNA repair mechanisms. Genome Biology and Evolution 5:1079−86

doi: 10.1093/gbe/evt069
[25]

Araya A, Bégu D, Litvak S. 1994. RNA editing in plants. Physiologia Plantarum 91:543−50

doi: 10.1111/j.1399-3054.1994.tb02986.x
[26]

Araya A, Zabaleta E, Blanc V, Bégu D, Hernould M, et al. 1998. RNA editing in plant mitochondria; cytoplasmic male sterility and plant breeding. Electronic Journal of Biotechnology 15:31−39

[27]

Kubo T, Newton KJ. 2008. Angiosperm mitochondrial genomes and mutations. Mitochondrion 8:5−14

doi: 10.1016/j.mito.2007.10.006
[28]

Bonavita S, Regina TMR. 2016. The evolutionary conservation of rps3 introns and rps19-rps3-rpl16 gene cluster in Adiantum capillus-veneris mitochondria. Current Genetics 62:173−84

doi: 10.1007/s00294-015-0512-z