doi:10.48130/FruRes-2023-0022

[1]

Koike H, Makita H, Tsukahara K. 1993. Effect of an apple-chlorotic-leaf-spot-virus free M. 9 rootstock on the growth of apple trees. Journal of the Japanese Society for Horticultural Science 62:499−504

doi: 10.2503/jjshs.62.499

[2]

Hadidi A, Barba M. 2011. Economic impact of pome and stone fruit viruses and viroids. In Virus and Virus-Like Diseases of Pome and Stone Fruits, eds Hadidi A, Barba M, Candresse T, Jelkmann W, x, 429 pp. St. Paul, MN, USA: The American Phytopathological Society. pp 1−7. https://doi.org/10.1094/9780890545010.001

[3]

Massart S, Jijakli MH, Kummert J. 2011. Apple stem grooving virus. In Virus and Virus-Like Diseases of Pome and Stone Fruits, eds Hadidi A, Barba M, Candresse T, Jelkmann W, x, 429 pp. St. Paul, MN, USA: The American Phytopathological Society. pp 29−33. https://doi.org/10.1094/9780890545010.007

[4]

Zhao L, Hao X, Liu P, Wu Y. 2012. Complete sequence of an Apple stem grooving virus (ASGV) isolate from China. Virus Genes 45:596−99

doi: 10.1007/s11262-012-0799-5

[5]

Wang M, Li B, Feng C, Wang Q. 2016. Culture of shoot tips from adventitious shoots can eradicate Apple stem pitting virus but fails in Apple stem grooving virus. Plant Cell, Tissue and Organ Culture (PCTOC) 125:283−91

doi: 10.1007/s11240-016-0948-y

[6]

Bhardwaj P, Hallan V. 2019. Molecular evidence of Apple stem grooving virus infecting Ficus palmata. Trees 33:1−9

doi: 10.1007/s00468-018-1752-6

[7]

Ji Z, Zhao X, Duan H, Hu T, Wang S, et al. 2013. Multiplex RT-PCR detection and distribution of four apple viruses in China. Acta Virologica 57:435−41

doi: 10.4149/av_2013_04_435

[8]

Nabi SU, Madhu GS, Rao GP, Baranwal VK. 2022. Development of multiplex RT-PCR assay for simultaneous detection of four viruses infecting apple (Malus domestica). Letters in Applied Microbiology 74:586−92

doi: 10.1111/lam.13643

[9]

Nemchinov L, Hadidi A, Foster JA, Candresse T, Verderevskaya T. 1995. Sensitive detection of Apple chlorotic leaf spot virus from infected apple or peach tissue using RT-PCR, IC-RT-PCR, or multiplex IC-RT-PCR. Acta Horticulturae 386:51−62

doi: 10.17660/actahortic.1995.386.4

[10]

Minutolo M, Cinque M, Chiumenti M, Di Serio F, Alioto D, et al. 2021. Identification and characterization of Citrus concave gum-associated virus infecting Citrus and apple trees by serological, molecular and high-throughput sequencing approaches. Plants 10:2390

doi: 10.3390/plants10112390

[11]

Noorani MS, Awasthi P, Sharma MP, Ram R, Zaidi AA, et al. 2013. Simultaneous detection and identification of four cherry viruses by two step multiplex RT-PCR with an internal control of plant nad5 mRNA. Journal of Virological Methods 193:103−7

doi: 10.1016/j.jviromet.2013.05.006

[12]

Osman F, Rwahnih MA, Rowhani A. 2017. Real-time RT-qPCR detection of Cherry rasp leaf virus, Cherry green ring mottle virus, Cherry necrotic rusty mottle virus, Cherry virus a and apple chlorotic leaf spot virus in stone fruits. Journal of Plant Pathology 99:279−85

[13]

Zeng T, Chen X, Liao P, Gao H, Zheng C, et al. 2022. Development of transcription recombinase polymerase based isothermal amplification coupled with lateral flow immunochromatographic assay for visual detection of citrus tatter leaf virus. Journal of Virological Methods 309:114593

doi: 10.1016/j.jviromet.2022.114593

[14]

Li J, Macdonald J, von Stetten F. 2019. Review: a comprehensive summary of a decade development of the recombinase polymerase amplification. Analyst 144:31−67

doi: 10.1039/c8an01621f

[15]

Naveen KP, Bhat AI. 2020. Reverse transcriptase loop-mediated isothermal amplification and reverse transcriptase recombinase amplification assays for rapid and sensitive detection of cardamom vein clearing virus. 3 Biotech 10:250

doi: 10.1007/s13205-020-02238-w

[16]

Kim NY, Oh J, Lee SH, Kim H, Moon JS, et al. 2018. Rapid and specific detection of Apple stem grooving virus by reverse transcription-recombinase polymerase amplification. The Plant Pathology Journal 34:575−79

doi: 10.5423/PPJ.NT.06.2018.0108

[17]

Kim NY, Lee HJ, Jeong RD. 2019. A portable detection assay for Apple stem pitting virus using reverse transcription-recombinase polymerase amplification. Journal of Virological Methods 274:113747

doi: 10.1016/j.jviromet.2019.113747

[18]

Qin J, Yin Z, Shen D, Chen H, Chen X, et al. 2021. Development of a recombinase polymerase amplification combined with lateral flow dipstick assay for rapid and sensitive detection of bean common mosaic virus. Phytopathology Research 3:3

doi: 10.1186/s42483-021-00080-3

[19]

Mekuria TA, Zhang S, Eastwell KC. 2014. Rapid and sensitive detection of Little cherry virus 2 using isothermal reverse transcription-recombinase polymerase amplification. Journal of Virological Methods 205:24−30

doi: 10.1016/j.jviromet.2014.04.015

[20]

Jaroenram W, Owens L. 2014. Recombinase polymerase amplification combined with a lateral flow dipstick for discriminating between infectious Penaeus stylirostris densovirus and virus-related sequences in shrimp genome. Journal of Virological Methods 208:144−51

doi: 10.1016/j.jviromet.2014.08.006

[21]

Babujee L, Witherell RA, Mikami K, Aiuchi D, Charkowski AO, et al. 2019. Optimization of an isothermal recombinase polymerase amplification method for real-time detection of Potato virus Y O and N types in potato. Journal of Virological Methods 267:16−21

doi: 10.1016/j.jviromet.2019.02.006

[22]

Hwang H, Bae SC, Lee S, Lee YH, Chang A. 2013. A rapid and simple genotyping method for various plants by direct-PCR. Plant Breeding and Biotechnology 1:290−97

doi: 10.9787/pbb.2013.1.3.290

[23]

Wang M, Hao X, Zhao L, Cui Z, Volk GM, et al. 2018. Virus infection reduces shoot proliferation of in vitro stock cultures and ability of cryopreserved shoot tips to regenerate into normal shoots in 'Gala' apple (Malus × domestica). Cryobiology 84:52−58

doi: 10.1016/j.cryobiol.2018.08.002

[24]

Wang Y, Chen R, Nie X, Zhong Z, Li C, et al. 2020. Rapid and sensitive detection of potato virus Y by isothermal reverse transcription-recombinase polymerase amplification assay in potato. Molecular and Cellular Probes 50:101505

doi: 10.1016/j.mcp.2019.101505

[25]

Babu B, Washburn BK, Miller SH, Poduch K, Sarigul T, et al. 2017. A rapid assay for detection of Rose rosette virus using reverse transcription-recombinase polymerase amplification using multiple gene targets. Journal of Virological Methods 240:78−84

doi: 10.1016/j.jviromet.2016.11.014

[26]

James D, Trytten PA, Mackenzie DJ, Towers GHN, French CJ. 1997. Elimination of apple stem grooving virus by chemotherapy and development of an immunocapture RT-PCR for rapid sensitive screening. Annals of Applied Biology 131:459−70

doi: 10.1111/j.1744-7348.1997.tb05173.x

[27]

Zhao L, Feng C, Li B, Hao X, Liu H, et al. 2014. Rapid detection of apple stem grooving virus by reverse transcription loop-mediated isothermal amplification. Journal of Plant Pathology 96:407−9

[28]

Lu Y, Yao B, Wang G, Hong N. 2018. The detection of ACLSV and ASPV in pear plants by RT-LAMP assays. Journal of Virological Methods 252:80−85

doi: 10.1016/j.jviromet.2017.11.010

[29]

Lee HJ, Jeong RD. 2022. A reliable reverse transcription loop-mediated isothermal amplification assay for detecting Apple stem grooving virus in pear. Research in Plant Disease 28:92−97

doi: 10.5423/RPD.2022.28.2.92

[30]

Kong L, Wang H, Wang S, Xu P, Zhang R, et al. 2020. Rapid detection of potato late blight using a loop-mediated isothermal amplification assay. Journal of Integrative Agriculture 19:1274−82

doi: 10.1016/S2095-3119(19)62816-9

[31]

Londoño MA, Harmon CL, Polston JE. 2016. Evaluation of recombinase polymerase amplification for detection of begomoviruses by plant diagnostic clinics. Virology Journal 13:48

doi: 10.1186/s12985-015-0456-4

[32]

Zhang S, Ravelonandro M, Russell P, McOwen N, Briard P, et al. 2014. Rapid diagnostic detection of plum pox virus in Prunus plants by isothermal AmplifyRP® using reverse transcription-recombinase polymerase amplification. Journal of Virological Methods 207:114−20

doi: 10.1016/j.jviromet.2014.06.026

[33]

Raigond B, Pathania S, Verma A, Verma G, Kochhar T, et al. 2021. Recombinase Polymerase Amplification assay for rapid detection of a geminivirus associated with potato apical leaf curl disease. Journal of Plant Diseases and Protection 128:1061−71

doi: 10.1007/s41348-021-00466-7

[34]

Kumar R, Kaundal P, Tiwari RK, Siddappa S, Kumari H, et al. 2021. Rapid and sensitive detection of potato virus X by one-step reverse transcription-recombinase polymerase amplification method in potato leaves and dormant tubers. Molecular and Cellular Probes 58:101743

doi: 10.1016/j.mcp.2021.101743

[35]

Silva G, Oyekanmi J, Nkere CK, Bömer M, Kumar PL, et al. 2018. Rapid detection of potyviruses from crude plant extracts. Analytical Biochemistry 546:17−22

doi: 10.1016/j.ab.2018.01.019

[36]

Murashige T, Skoog F. 1962. A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiologia Plantarum 15:473−97

doi: 10.1111/j.1399-3054.1962.tb08052.x

[37]

MacKenzie DJ, McLean MA, Mukerji S, Green M. 1997. Improved RNA extraction from woody plants for the detection of viral pathogens by reverse transcription-polymerase chain reaction. Plant Disease 81:222−26

doi: 10.1094/PDIS.1997.81.2.222

[38]

Menzel W, Zahn V, Maiss E. 2003. Multiplex RT-PCR-ELISA compared with bioassay for the detection of four apple viruses. Journal of Virological Methods 110:153−57

doi: 10.1016/S0166-0934(03)00112-5

[39]

Candresse T, German S, Lanneau M, Dunez J. 1996. In vitro translation of apple chlorotic leaf spot virus (ACLSV) RNA. Archives of Virology 141:2031−43

doi: 10.1007/BF01718213