[1] |
Gao M, Wang J, Lv Z. 2023. Supplementing Genistein for Breeder Hens Alters the Growth Performance and Intestinal Health of Offspring. Life 13:1468 doi: 10.3390/life13071468 |
[2] |
Macpherson AJ, de Agüero MG, Ganal-Vonarburg SC. 2017. How nutrition and the maternal microbiota shape the neonatal immune system. Nature Reviews Immunology 17:508−17 doi: 10.1038/nri.2017.58 |
[3] |
Percy Z, Vuong AM, Xu Y, Xie C, Ospina M, et al. 2021. Maternal Urinary Organophosphate Esters and Alterations in Maternal and Neonatal Thyroid Hormones. American Journal of Epidemiology 190:1793−802 doi: 10.1093/aje/kwab086 |
[4] |
Das A, Iwata-Otsubo A, Destouni A, Dawicki-McKenna JM, Boese KG, et al. 2022. Epigenetic, genetic and maternal effects enable stable centromere inheritance. Nature Cell Biology 24:748−56 doi: 10.1038/s41556-022-00897-w |
[5] |
Wong EA, Uni Z. 2021. Centennial Review: The chicken yolk sac is a multifunctional organ. Poultry Science 100:100821 doi: 10.1016/j.psj.2020.11.004 |
[6] |
Fan H, Lv Z, Gan L, Guo Y. 2018. Transcriptomics-Related Mechanisms of Supplementing Laying Broiler Breeder Hens with Dietary Daidzein to Improve the Immune Function and Growth Performance of Offspring. Journal of Agricultural and Food Chemistry 66:2049−60 doi: 10.1021/acs.jafc.7b06069 |
[7] |
Lv Z, Fan H, Zhang B, Ning C, Xing K, et al. 2018. Dietary genistein supplementation in laying broiler breeder hens alters the development and metabolism of offspring embryos as revealed by hepatic transcriptome analysis. The FASEB Journal 32:4214−28 doi: 10.1096/fj.201701457R |
[8] |
Na W, Wu YY, Gong PF, Wu CY, Cheng BH, et al. 2018. Embryonic transcriptome and proteome analyses on hepatic lipid metabolism in chickens divergently selected for abdominal fat content. BMC Genomics 19:384 doi: 10.1186/s12864-018-4776-9 |
[9] |
Bednarczyk M, Dunislawska A, Stadnicka K, Grochowska E. 2021. Chicken embryo as a model in epigenetic research. Poultry Science 100:101164 doi: 10.1016/j.psj.2021.101164 |
[10] |
Zhang M, Ma X, Zhai Y, Zhang D, Sui L, et al. 2020. Comprehensive transcriptome analysis of lncRNAs reveals the role of lncAD in chicken intramuscular and abdominal adipogenesis. Journal of Agricultural and Food Chemistry 68:3678−88 doi: 10.1021/acs.jafc.9b07405 |
[11] |
Sarropoulos I, Marin R, Cardoso-Moreira M, Kaessmann H. 2019. Developmental dynamics of lncRNAs across mammalian organs and species. Nature 571:510−14 doi: 10.1038/s41586-019-1341-x |
[12] |
Wang Z, Kong L, Zhu L, Hu X, Su P, et al. 2021. The mixed application of organic and inorganic selenium shows better effects on incubation and progeny parameters. Poultry Science 100:1132−41 doi: 10.1016/j.psj.2020.10.037 |
[13] |
Fu C, Zhang Y, Yao Q, Wei X, Shi T, et al. 2020. Maternal conjugated linoleic acid alters hepatic lipid metabolism via the AMPK signaling pathway in chick embryos. Poultry Science 99:224−34 doi: 10.3382/ps/pez462 |
[14] |
Liu X, Fang Y, Ma X, Li P, Wang P, et al. 2022. Metabolomic profiling to assess the effects of chlordanes and its bioaccumulation characteristics in chicken embryo. Chemosphere 308:136580 doi: 10.1016/j.chemosphere.2022.136580 |
[15] |
Li C, Guo S, Zhang M, Gao J, Guo Y. 2015. DNA methylation and histone modification patterns during the late embryonic and early postnatal development of chickens. Poultry Science 94:706−21 doi: 10.3382/ps/pev016 |
[16] |
Gao M, Liao C, Fu J, Ning Z, Lv Z, et al. 2024. Probiotic cocktails accelerate baicalin metabolism in the ileum to modulate intestinal health in broiler chickens. Journal of Animal Science and Biotechnology 15:25 doi: 10.1186/s40104-023-00974-6 |
[17] |
Lv Z, Fan H, Gao M, Zhang X, Li G, et al. 2024. The accessible chromatin landscape of lipopolysaccharide-induced systemic inflammatory response identifying epigenome signatures and transcription regulatory networks in chickens. International Journal of Biological Macromolecules 266:131136 doi: 10.1016/j.ijbiomac.2024.131136 |
[18] |
Gao M, Chen Y, Li X, Li D, Liu A, et al. 2024. Methionine supplementation regulates eggshell quality and uterine transcriptome in late-stage broiler breeders. Animal Nutrition In press doi: 10.1016/j.aninu.2024.04.026 |
[19] |
Dai H, Huang Z, Shi F, Li S, Zhang Y, et al. 2024. Effects of maternal hawthorn-leaf flavonoid supplementation on the intestinal development of offspring chicks. Poultry Science 103:103969 doi: 10.1016/j.psj.2024.103969 |
[20] |
Ren J, Sun C, Clinton M, Yang N. 2019. Dynamic transcriptional landscape of the early chick embryo. Frontiers in Cell and Developmental Biology 7:196 doi: 10.3389/fcell.2019.00196 |
[21] |
Liao L, Yao Z, Kong J, Zhang X, Li H, et al. 2022. Transcriptomic analysis reveals the dynamic changes of transcription factors during early development of chicken embryo. BMC Genomics 23:825 doi: 10.1186/s12864-022-09054-x |
[22] |
Hivert MF, White F, Allard C, James K, Majid S, et al. 2024. Placental IGFBP1 levels during early pregnancy and the risk of insulin resistance and gestational diabetes. Nature Medicine 30:1689−95 doi: 10.1038/s41591-024-02936-5 |
[23] |
Salvatore D, Simonides WS, Dentice M, Zavacki AM, Larsen PR. 2014. Thyroid hormones and skeletal muscle—new insights and potential implications. Nature Reviews Endocrinology 10:206−14 doi: 10.1038/nrendo.2013.238 |
[24] |
Wakoh T, Sugimoto M, Terauchi K, Shimada J, Maruyama M. 2009. A novel p53-dependent apoptosis function of TARSH in tumor development. Nagoya Journal of Medical Science 71:109−14 |
[25] |
Wei W, Qin B, Wen W, Zhang B, Luo H, et al. 2023. FBXW7β loss-of-function enhances FASN-mediated lipogenesis and promotes colorectal cancer growth. Signal Transduction and Targeted Therapy 8:187 doi: 10.1038/s41392-023-01405-8 |
[26] |
Ding Y, Yang J, Ma Y, Yao T, Chen X, et al. 2019. MYCN and PRC1 cooperatively repress docosahexaenoic acid synthesis in neuroblastoma via ELOVL2. Journal of Experimental & Clinical Cancer Research 38:498 doi: 10.1186/s13046-019-1492-5 |
[27] |
Zuidhof MJ, Schneider BL, Carney VL, Korver DR, Robinson FE. 2014. Growth, efficiency, and yield of commercial broilers from 1957, 1978, and 2005. Poult Sci 93:2970−82 doi: 10.3382/ps.2014-04291 |
[28] |
Briggs JA, Weinreb C, Wagner DE, Megason S, Peshkin L, et al. 2018. The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution. Science 360:eaar5780 doi: 10.1126/science.aar5780 |
[29] |
Han VX, Patel S, Jones HF, Dale RC. 2021. Maternal immune activation and neuroinflammation in human neurodevelopmental disorders. Nature Reviews Neurology 17:564−79 doi: 10.1038/s41582-021-00530-8 |
[30] |
Cai B, Li Z, Ma M, Wang Z, Han P, et al. 2017. LncRNA-Six1 encodes a micropeptide to activate Six1 in cis and is involved in cell proliferation and muscle growth. Frontiers in Physiology 8:230 doi: 10.3389/fphys.2017.00230 |
[31] |
Ahrens M, Ammerpohl O, von Schönfels W, Kolarova J, Bens S, et al. 2013. DNA methylation analysis in nonalcoholic fatty liver disease suggests distinct disease-specific and remodeling signatures after bariatric surgery. Cell Metabolism 18:296−302 doi: 10.1016/j.cmet.2013.07.004 |
[32] |
Martín AI, Priego T, Moreno-Ruperez Á, González-Hedström D, Granado M, et al. 2021. IGF-1 and IGFBP-3 in inflammatory cachexia. International Journal of Molecular Sciences 22:9469 doi: 10.3390/ijms22179469 |
[33] |
Burgdorf JS, Yoon S, Dos Santos M, Lammert CR, Moskal JR, et al. 2023. An IGFBP2-derived peptide promotes neuroplasticity and rescues deficits in a mouse model of Phelan-McDermid syndrome. Molecular Psychiatry 28:1101−11 doi: 10.1038/s41380-022-01904-0 |
[34] |
Yin H, Zhang S, Sun Y, Li S, Ning Y, et al. 2017. MicroRNA-34/449 targets IGFBP-3 and attenuates airway remodeling by suppressing Nur77-mediated autophagy. Cell Death & Disease 8:e2998 doi: 10.1038/cddis.2017.357 |
[35] |
Liu Y, Zhang M, He T, Yang W, Wang L, et al. 2020. Epigenetic silencing of IGFBPL1 promotes esophageal cancer growth by activating PI3K-AKT signaling. Clinical Epigenetics 12:22 doi: 10.1186/s13148-020-0815-x |
[36] |
Liu J, Tang T, Wang GD, Liu B. 2019. LncRNA-H19 promotes hepatic lipogenesis by directly regulating miR-130a/PPARγ axis in non-alcoholic fatty liver disease. Bioscience Reports 39:BSR20181722 doi: 10.1042/BSR20181722 |
[37] |
Li X, Wang J, Wang L, Gao Y, Feng G, et al. 2022. Lipid metabolism dysfunction induced by age-dependent DNA methylation accelerates aging. Signal Transduction and Targeted Therapy 7:162 doi: 10.1038/s41392-022-00964-6 |
[38] |
Jaynes JM, Sable R, Ronzetti M, Bautista W, Knotts Z, et al. 2020. Mannose receptor (CD206) activation in tumor-associated macrophages enhances adaptive and innate antitumor immune responses. Science Translational Medicine 12:eaax6337 doi: 10.1126/scitranslmed.aax6337 |
[39] |
Hossain MI, Marcus JM, Lee JH, Garcia PL, Singh V, et al. 2021. Restoration of CTSD (cathepsin D) and lysosomal function in stroke is neuroprotective. Autophagy 17:1330−48 doi: 10.1080/15548627.2020.1761219 |
[40] |
Zhang X, Wei M, Fan J, Yan W, Zha X, et al. 2021. Ischemia-induced upregulation of autophagy preludes dysfunctional lysosomal storage and associated synaptic impairments in neurons. Autophagy 17:1519−42 doi: 10.1080/15548627.2020.1840796 |
[41] |
Feng J, Lin P, Wang Y, Zhang Z. 2019. Molecular characterization, expression patterns, and functional analysis of toll-interacting protein (Tollip) in Japanese eel Anguilla japonica. Fish & Shellfish Immunology 90:52−64 doi: 10.1016/j.fsi.2019.04.053 |
[42] |
Quince C, Walker AW, Simpson JT, Loman NJ, Segata N. 2017. Shotgun metagenomics, from sampling to analysis. Nature Biotechnology 35:833−44 doi: 10.1038/nbt.3935 |
[43] |
Ouyang Q, Hu S, Li L, Ran M, Zhu J, et al. 2021. Integrated mRNA and miRNA transcriptome analysis provides novel insights into the molecular mechanisms underlying goose pituitary development during the embryo-to-hatchling transition. Poultry Science 100:101380 doi: 10.1016/j.psj.2021.101380 |
[44] |
Tritsch NX, Granger AJ, Sabatini BL. 2016. Mechanisms and functions of GABA co-release. Nature Reviews Neuroscience 17:139−45 doi: 10.1038/nrn.2015.21 |
[45] |
Cao C, Cai Y, Li Y, Li T, Zhang J, et al. 2023. Characterization and comparative transcriptomic analysis of skeletal muscle in female Pekin duck and Hanzhong Ma duck during different growth stages using RNA-seq. Poultry Science 102:103122 doi: 10.1016/j.psj.2023.103122 |
[46] |
Yin L, Chen Q, Huang Q, Wang X, Zhang D, et al. 2023. Physiological role of dietary energy in the sexual maturity: clues of body size, gonad development, and serum biochemical parameters of Chinese indigenous chicken. Poultry Science 102:103157 doi: 10.1016/j.psj.2023.103157 |
[47] |
Li-Villarreal N, Forbes MM, Loza AJ, Chen J, Ma T, et al. 2015. Dachsous1b cadherin regulates actin and microtubule cytoskeleton during early zebrafish embryogenesis. Development 142:2704−18 doi: 10.1242/dev.119800 |
[48] |
Bechstedt S, Albert JT, Kreil DP, Müller-Reichert T, Göpfert MC, et al. 2010. A doublecortin containing microtubule-associated protein is implicated in mechanotransduction in Drosophila sensory cilia. Nature Communications 1:11 doi: 10.1038/ncomms1007 |
[49] |
McKenna ED, Sarbanes SL, Cummings SW, Roll-Mecak A. 2023. The tubulin code, from molecules to health and disease. Annual Review of Cell and Developmental Biology 39:331−61 doi: 10.1146/annurev-cellbio-030123-032748 |
[50] |
Vitre B, Guesdon A, Delaval B. 2020. Non-ciliary roles of IFT proteins in cell division and polycystic kidney diseases. Frontiers in Cell and Developmental Biology 8:578239 doi: 10.3389/fcell.2020.578239 |