[1]

Eriksson OE, Hawksworth DL. 1986. Outline of Ascomycetes. Systema Ascomycetum 5:185−324

doi: 10.5962/p.417350
[2]

Smith GJD, Liew ECY, Hyde KD. 2003. The Xylariales: a monophyletic order containing 7 families. Fungal Diversity 13:185−218

[3]

Tang AMC, Jeewon R, Hyde KD. 2009. A re-evaluation of the evolutionary relationships within the Xylariaceae based on ribosomal and protein-coding gene sequences. Fungal Diversity 34:127−155

[4]

Jaklitsch WM, Gardiennet A, Voglmayr H. 2016. Resolution of morphology-based taxonomic delusions: Acrocordiella, Basiseptospora, Blogiascospora, Clypeosphaeria, Hymenopleella, Lepteutypa, Pseudapiospora, Requienella, Seiridium and Strickeria. Persoonia - Molecular Phylogeny and Evolution of Fungi 37(1):82−105

doi: 10.3767/003158516X690475
[5]

Maharachchikumbura SSN, Hyde KD, Jones EBG, McKenzie EHC, Bhat JD, et al. 2016. Families of Sordariomycetes. Fungal Diversity 79(1):1−317

doi: 10.1007/s13225-016-0369-6
[6]

Senanayake IC, Maharachchikumbura SSN, Hyde KD, Bhat JD, Jones EBG, et al. 2015. Towards unraveling relationships in Xylariomycetidae (Sordariomycetes). Fungal Diversity 73:73−144

doi: 10.1007/s13225-015-0340-y
[7]

Samarakoon MC, Hyde KD, Promputtha I, Hongsanan S, Ariyawansa HA, et al. 2016. Evolution of Xylariomycetidae (Ascomycota: Sordariomycetes). Mycosphere 7(11):1746−1761

doi: 10.5943/mycosphere/7/11/9
[8]

Hongsanan S, Maharachchikumbura SSN, Hyde KD, Samarakoon MC, Jeewon R, et al. 2017. An updated phylogeny of sordariomycetes based on phylogenetic and molecular clock evidence. Fungal Diversity 84(3):25−41

doi: 10.1007/s13225-017-0384-2
[9]

Hyde KD, Maharachchikumbura SSN, Hongsanan S, Samarakoon MC, Lücking R, et al. 2017. The ranking of fungi: a tribute to David L. Hawksworth on his 70th birthday. Fungal Diversity 84(4):1−23

doi: 10.1007/s13225-017-0383-3
[10]

Hyde KD, Norphanphoun C, Maharachchikumbura SSN, Bhat DJ, Jones EBG, et al. 2020. Refined families of Sordariomycetes. Mycosphere 11(1):305−1059

doi: 10.5943/mycosphere/11/1/7
[11]

Samarakoon MC, Hyde KD, Maharachchikumbura SSN, Stadler M, Jones EBG, et al. 2022. Taxonomy, phylogeny, molecular dating and ancestral state reconstruction of Xylariomycetidae (Sordariomycetes). Fungal Diversity 112(1):1−88

doi: 10.21203/rs.3.rs-935829/v1
[12]

Thiyagaraja V, Hyde KD, Piepenbring M, Davydov EA, Dai DQ, et al. 2025. Orders of Ascomycota. Mycosphere 16(1):536−1411

doi: 10.5943/mycosphere/16/1/8
[13]

Rai MK. 1989. Mycosis in man due to Arthrinium phaeospermum var. indicum. first case report: mykose durch Arthrinium phaeospermum var. indicum beim Menschen. Erstbericht. Mycoses 32(9):472−475

doi: 10.1111/j.1439-0507.1989.tb02285.x
[14]

Zhang P, Li X, Yuan XL, Du YM, Wang BG, et al. 2018. Antifungal prenylated diphenyl ethers from Arthrinium arundinis, an endophytic fungus isolated from the leaves of tobacco (Nicotiana tabacum L.). Molecules 23(12):3179

doi: 10.3390/molecules23123179
[15]

Sparapano L, Evidente A. 1995. Studies on structure-activity relationship of seiridins, phytotoxins produced by three species of Seiridium. Natural Toxins 3(3):166−173

doi: 10.1002/nt.2620030308
[16]

Hyde KD, Noorabadi MT, Thiyagaraja V, He MQ, Johnston PR, et al. 2024. The 2024 outline of Fungi and fungus-like taxa. Mycosphere 15(1):5146−6239

doi: 10.5943/mycosphere/15/1/25
[17]

Hyde KD, Fröhlich J, Taylor JE. 1998. Fungi from palms. XXXVI. Reflections on unitunicate ascomycetes with apiospores. Sydowia 50(1):21−80

[18]

Saccardo PA. 1875. Conspectus generum pyrenomycetum italicorum additis speciebus fungorum venetorum novis vel criticis, systemate carpologico dispositorum. Atti della SocietàVeneto-Trentina di Scienze Naturali 4:77−100 (in Latin)

[19]

Kunze G, Schmidt JC. 1817. Mykologische Hefte. Leipzig: G. Voss. www.cybertruffle.org.uk/cyberliber/01553/r001.htm

[20]

Fries EM. 1832. Systema Mycologicum. Greifswald: Sumptibus Ernesti Mauritii. www.biodiversitylibrary.org/item/25330#page/271/mode/1up (in Latin)

[21]

Hawksworth DL. 2012. Managing and coping with names of pleomorphic fungi in a period of transition. IMA Fungus 3(1):15−24

doi: 10.5598/imafungus.2012.03.01.03
[22]

Crous PW, Groenewald JZ. 2013. A phylogenetic re-evaluation of Arthrinium. IMA Fungus 4(1):133−154

doi: 10.5598/imafungus.2013.04.01.13
[23]

Samarakoon BC, Wanasinghe DN, Samarakoon MC, Phookamsak R, McKenzie EHC, et al. 2020. Multi-gene phylogenetic evidence suggests Dictyoarthrinium belongs in Didymosphaeriaceae (Pleosporales, Dothideomycetes) and Dictyoarthrinium musae sp. nov. on Musa from Thailand. MycoKeys 71:101−118

doi: 10.3897/mycokeys.71.55493
[24]

Konta S, Hyde KD, Eungwanichayapant PD, Karunarathna SC, Samarakoon MC, et al. 2021. Multigene phylogeny reveals Haploanthostomella elaeidis gen. et sp. nov. and familial replacement of Endocalyx (Xylariales, Sordariomycetes, Ascomycota). Life 11(6):486

doi: 10.3390/life11060486
[25]

Pintos Á, Alvarado P. 2021. Phylogenetic delimitation of Apiospora and Arthrinium. Fungal Systematics and Evolution 7(1):197−221

doi: 10.3114/fuse.2021.07.10
[26]

Pintos A, Alvarado P. 2022. New studies on Apiospora (Amphisphaeriales, Apiosporaceae): epitypification of Sphaeria apiospora, proposal of Ap. marianiae sp. nov. and description of the asexual morph of Ap. sichuanensis. MycoKeys 92:63−78

doi: 10.3897/mycokeys.92.87593
[27]

Li S, Peng C, Yuan R, Tian C. 2023. Morphological and phylogenetic analyses reveal three new species of Apiospora in China. MycoKeys 99:297−317

doi: 10.3897/mycokeys.99.108384
[28]

Chang XY, Wang YY, Xu T, Li GS, Yue XH, et al. 2025. Three new species of Apiospora (Apiosporaceae, Amphisphaeriales) associated with diseased bamboo in China. MycoKeys 116:205−226

doi: 10.3897/mycokeys.116.142263
[29]

Liu RY, Li DH, Zhang ZX, Liu SB, Liu XY, et al. 2023. Morphological and phylogenetic analyses reveal two new species and a new record of Apiospora (Amphisphaeriales, Apiosporaceae) in China. MycoKeys 95:27−45

doi: 10.3897/mycokeys.95.96400
[30]

Saccardo PA. 1886. Sylloge fungorum omnium hucusque cognitorum. Padua: Sumptibus auctoris. https://archive.org/details/syllogefungorumo04sacc/page/n7/mode/2up

[31]

Nannizzi A. 1934. Repertorio sistematico dei miceti dell'uomo e degli animali. In Trattato di micopatologia umana (in ltalian). 557 pp. Siena, Italy: Poligrafica Meini.

[32]

Crous PW, Wingfield MJ, Roux JJL, Richardson DM, Strasberg D, et al. 2015. Fungal planet description sheets: 371-399. Persoonia - Molecular Phylogeny and Evolution of Fungi 35:264−327

doi: 10.3767/003158515X690269
[33]

Rajeshkumar KC, Crous PW, Groenewald JZ, Seifert KA. 2016. Resolving the phylogenetic placement of Porobeltraniella and allied genera in the Beltraniaceae. Mycological Progress 15(10):1119−1136

doi: 10.1007/s11557-016-1234-4
[34]

Crous PW, Wingfield MJ, Burgess TI, Carnegie AJ, Hardy GESJ, et al. 2017. Fungal planet description sheets: 625-715. Persoonia - Molecular Phylogeny and Evolution of Fungi 39(1):270−467

doi: 10.3767/persoonia.2017.39.11
[35]

Lin CG, Dai DQ, Bhat DJ, Hyde KD, Tang LZ, et al. 2017. Subsessila turbinata gen. et. sp. nov. (Beltraniaceae), a Beltrania-like fungus from Thailand. Mycological Progress 16(3):393−401

doi: 10.1007/s11557-017-1279-z
[36]

CastaÑEda-Ruiz RF, Mardones M, Souza MGAP, Li DW, Kirk PM, et al. 2024. New and validated hyphomycetes taxa described by A. Rambelli from Costa Rica. Phytotaxa 664(2):151−154

doi: 10.11646/phytotaxa.664.2.8
[37]

Liu QY, Li DH, Zhang ZX, Geng Y, Li Z, et al. 2025. Morpho-phylogenetic evidence reveals new species and records of Beltraniaceae (Amphisphaeriales, Sordariomycetes) from southern China. MycoKeys 123:1−28

doi: 10.3897/mycokeys.123.160374
[38]

Corda ACJ. 1842. Icones fungorum hucusque cognitorum (in Latin). pp. i–vii, 1–92. Prague: J. G. Calve.

[39]

Kirk PM, Cannon PF, Minter DW, Stalpers JA. 2008. Dictionary of the Fungi. 10th Edition. Wallingford, UK: CAB International. https://scispace.com/pdf/dictionary-of-the-fungi-2qvwmcrgec.pdf

[40]

Liu F, Bonthond G, Groenewald JZ, Cai L, Crous PW. 2019. Sporocadaceae, a family of coelomycetous fungi with appendage-bearing conidia. Studies in Mycology 92:287−415

doi: 10.1016/j.simyco.2018.11.001
[41]

Steyaert RL. 1949. Contribution à l'étude monographique de Pestalotia de Not. Et Monochaetia Sacc. (Truncatella gen. nov. et Pestalotiopsis gen. nov.). Bulletin du Jardin Botanique de l‘Etat, Bruxelles 19:285−354

doi: 10.2307/3666710
[42]

Maharachchikumbura SSN, Hyde KD, Groenewald JZ, Xu J, Crous PW. 2014. Pestalotiopsis revisited. Studies in Mycology 79:121−186

doi: 10.1016/j.simyco.2014.09.005
[43]

Liu AR, Chen SC, Wu SY, Xu T, Guo LD, et al. 2010. Cultural studies coupled with DNA based sequence analyses and its implication on pigmentation as a phylogenetic marker in Pestalotiopsis taxonomy. Molecular Phylogenetics and Evolution 57(2):528−535

doi: 10.1016/j.ympev.2010.07.017
[44]

Razaghi P, Raza M, Han SL, Ma ZY, Cai L, et al. 2024. Sporocadaceae revisited. Studies in Mycology 109(1):155−272

doi: 10.3114/sim.2024.109.03
[45]

Wang F, Wang K, Cai L, Zhao M, Kirk PM, et al. 2023. Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy. Nucleic Acids Research 51(D1):D708−D716

doi: 10.1093/nar/gkac926
[46]

Guo LD, Hyde KD, Liew ECY. 2000. Identification of endophytic fungi from Livistona chinensis based on morphology and rDNA sequences. New Phytologist 147(3):617−630

doi: 10.1046/j.1469-8137.2000.00716.x
[47]

White TJ, Bruns TD, Lee SB, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: A Guide to Methods and Applications, eds Innis MA, Gelfand DH, Sninsky JJ, White TJ. New York: Academic Press. pp. 315–322 doi: 10.1016/B978-0-12-372180-8.50042-1

[48]

Vilgalys R, Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172(8):4238−4246

doi: 10.1128/jb.172.8.4238-4246.1990
[49]

Rehner, SA, Samuels, GJ. 1994. Taxonomy and phylogeny of Gliocladium analysed from nuclear large subunit ribosomal DNA sequences. Mycological Research 98(6):625−634

doi: 10.1016/S0953-7562(09)80409-7
[50]

O‘Donnell K, Kistler HC, Cigelnik E, Ploetz RC. 1998. Multiple evolutionary origins of the fungus causing Panama disease of banana: concordant evidence from nuclear and mitochondrial gene genealogies. Proceedings of the National Academy of Sciences of the United States of America 95(5):2044−2049

doi: 10.1073/pnas.95.5.2044
[51]

Carbone I, Kohn LM. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91(3):553−556

doi: 10.1080/00275514.1999.12061051
[52]

Glass NL, Donaldson GC. 1995. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Applied and Environmental Microbiology 61(4):1323−1330

doi: 10.1128/aem.61.4.1323-1330.1995
[53]

Bruen TC, Philippe H, Bryant D. 2006. A simple and robust statistical test for detecting the presence of recombination. Genetics 172(4):2665−2681

doi: 10.1534/genetics.105.048975
[54]

Huson DH, Bryant D. 2024. The splitstree app: interactive analysis and visualization using phylogenetic trees and networks. Nature Methods 21(10):1773−1774

doi: 10.1038/s41592-024-02406-3
[55]

Altschul SF, Gish W, Miller W, Myers EW, Lipmen DJ. 1990. Basic local alignment search tool. Journal of Molecular Biology 215(3):403−410

doi: 10.1016/S0022-2836(05)80360-2
[56]

Katoh K, Rozewicki J, Yamada KD. 2019. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Briefings in Bioinformatics 20(4):1160−1166

doi: 10.1093/bib/bbx108
[57]

Zhang ZX, Shang YX, Liu QY, Li DH, Yin CZ, et al. 2025. Deciphering the evolutionary and taxonomic complexity of Diaporthales (Sordariomycetes, Ascomycota) through integrated phylogenomic and divergence time estimation. Fungal Diversity 132:1−125

doi: 10.1007/s13225-025-00551-4
[58]

Letunic I, Bork P. 2021. Interactive tree of life (iTOL): an online tool for phylogenetic tree display and annotation. Bioinformatics 23(1):127−128

doi: 10.1093/bioinformatics/btl529
[59]

Francisco CS, Ma X, Zwyssig MM, McDonald BA, Palma-Guerrero J. 2019. Morphological changes in response to environmental stresses in the fungal plant pathogen Zymoseptoria tritici. Scientific Reports 9(1):9642

doi: 10.1038/s41598-019-45994-3
[60]

Liu XY, Zhang ZX, Wang S, Zhang XG. 2024. Three New Species of Apiospora (Amphisphaeriales, Apiosporaceae) on Indocalamus longiauritus, Adinandra glischroloma and Machilus nanmu from Hainan and Fujian, China. Journal of Fungi 10(1):74

doi: 10.3390/jof10010074
[61]

Dissanayake LS, Samarakoon MC, Maharachchikumbura SSN, Hyde KD, Tang X, et al. 2024. Exploring the taxonomy and phylogeny of Sordariomycetes taxa emphasizing Xylariomycetidae in southwestern China. Mycosphere 15(1):1675−1793

doi: 10.5943/mycosphere/15/1/15
[62]

Ai CC, Dong ZX, Yun JX, Zhang ZX, Xia JW, et al. 2024. Phylogeny, taxonomy and morphological characteristics of Apiospora (Amphisphaeriales, Apiosporaceae). Microorganisms 12(7):1372

doi: 10.3390/microorganisms12071372
[63]

Yu K, Zhang H, Cheng K, Jiang Y. 2025. Three new species of Apiospora (Amphisphaeriales, Apiosporaceae) in China. MycoKeys 112:233−252

doi: 10.3897/mycokeys.112.135493
[64]

Tian X, Karunarathna SC, Mapook A, Promputtha I, Xu J, et al. 2021. One new species and two new host records of Apiospora from bamboo and maize in Northern Thailand with thirteen new combinations. Life 11(10):1071

doi: 10.3390/life11101071
[65]

Zhang JY, Chen ML, Boonmee S, Wang YX, Lu YZ. 2023. Four new endophytic Apiospora species isolated from three Dicranopteris species in Guizhou, China. Journal of Fungi 9(11):1096

doi: 10.3390/jof9111096
[66]

Liao C, Senanayake IC, Dong W, Chethana KWT, Tangtrakulwanich K, et al. 2023. Taxonomic and phylogenetic updates on Apiospora: introducing four new species from Wurfbainia villosa and grasses in China. Journal of Fungi 9(11):1087

doi: 10.3390/jof9111087
[67]

Dai DQ, Jiang HB, Tang LZ, Bhat DJ. 2016. Two new species of Arthrinium (Apiosporaceae, Xylariales) associated with bamboo from Yunnan, China. Mycosphere 7(9):1332−1345

doi: 10.5943/mycosphere/7/9/7
[68]

Wang M, Tan XM, Liu F, Cai L. 2018. Eight new Arthrinium species from China. MycoKeys 3(34):1–24

doi: 10.3897/mycokeys.34.24221
[69]

Feng Y, Liu JK, Lin CG, Chen YY, Xiang MM, et al. 2021. Additions to the Genus Arthrinium (Apiosporaceae) from bamboos in China. Frontiers in Microbiology 12:661281

doi: 10.3389/fmicb.2021.661281
[70]

Tennakoon DS, Kuo CH, Maharachchikumbura SSN, Thambugala KM, Gentekaki E, et al. 2021. Taxonomic and phylogenetic contributions to Celtis formosana, Ficus ampelas, F. septica, Macaranga tanarius and Morus australis leaf litter inhabiting microfungi. Fungal Diversity 108(8):1−215

doi: 10.1007/s13225-021-00474-w
[71]

Zeng Q, Lv YC, Xu XL, Deng Y, Wang FH, et al. 2022. Morpho-molecular characterization of microfungi associated with Phyllostachys (Poaceae) in sichuan, China. Journal of Fungi 8(7):702

doi: 10.3390/jof8070702
[72]

Pintos A, Alvarado P, Planas J, Jarling R. 2019. Six new species of Arthrinium from Europe and notes about A. caricicola and other species found in Carex spp. hosts. MycoKeys 49:15−48

doi: 10.3897/mycokeys.49.32115
[73]

Kwon SL, Cho M, Lee YM, Lee H, Kim C, et al. 2022. Diversity of the bambusicolous fungus Apiospora in Korea: Discovery of New Apiospora Species. Mycobiology 50(5):302−316

doi: 10.1080/12298093.2022.2133808
[74]

Liang ZH, Li JN, Li X, Li P, Yang H. 2022. Isolation and identification of pathogens causing dragon stripe disease on Kadsura coccinea. Journal of King Saud University - Science 35(13):102516

doi: 10.1016/j.jksus.2022.102516
[75]

Zhao YZ, Zhang ZF, Cai L, Peng WJ, Liu F. 2018. Four new filamentous fungal species from newly-collected and hivestored bee pollen. Mycosphere 9(6):1089−1116

doi: 10.5943/mycosphere/9/6/3
[76]

Chen TZ, Zhang Y, Ming XB, Zhang Q, Long H, et al. 2021. Morphological and phylogenetic resolution of Arthrinium from medicinal plants in Yunnan, including A. cordylines and A. pseudomarii spp. nov. Mycotaxon 136(1):183−199

doi: 10.5248/136.183
[77]

Samarakoon BC, Wanasinghe DN, Samarakoon MC, Bundhun D, Jayawardena R, et al. 2024. Exploring fungi: a taxonomic and phylogenetic study of leaf-inhabiting Ascomycota in Musa species from northern Thailand, with a global checklist. Mycosphere 15(1):1901−2174

doi: 10.5943/mycosphere/15/1/17
[78]

Liu C, Lv Y, Zeng Q, Wang F, Yang C, et al. 2023. Culm blight on Phyllostachys aureosulcata ‘Spectabilis’ Caused by Apiospora locuta-pollinis in China. Plant Disease 107(6):1938

doi: 10.1094/PDIS-04-22-0956-PDN
[79]

Monkai J, Phookamsak R, Tennakoon DS, Bhat DJ, Xu S, et al. 2022. Insight into the taxonomic resolution of Apiospora: introducing novel species and records from bamboo in China and Thailand. Diversity 14(11):918

doi: 10.3390/d14110918
[80]

Shen HW, Bao DF, Luan S, Wanasinghe DN, Du TY, et al. 2025. Taxonomy and phylogeny of lignicolous freshwater fungi from plateau lakes in Yunnan Province, China. Fungal Diversity 134(1):635−899

doi: 10.1007/s13225-025-00564-z
[81]

Dai DQ, Phookamsak R, Wijayawardene NN, Li WJ, Bhat DJ, et al. 2016. Bambusicolous fungi. Fungal Diversity 82:1−105

doi: 10.1007/s13225-016-0367-8
[82]

Wang M, Liu F, Crous PW, Cai L. 2017. Phylogenetic reassessment of Nigrospora: ubiquitous endophytes, plant and human pathogens. Persoonia - Molecular Phylogeny and Evolution of Fungi 39:118−142

doi: 10.3767/persoonia.2017.39.06
[83]

Senanayake IC, Rossi W, Leonardi M, Weir A, McHugh M, et al. 2023. Fungal diversity notes 1611–1716: taxonomic and phylogenetic contributions on fungal genera and species emphasis in south China. Fungal Diversity 122(4):161−403

doi: 10.1007/s13225-023-00523-6
[84]

Crous PW, Carnegie AJ, Wingfield MJ, Sharma R, Mughini G, et al. 2019. Fungal planet description sheets: 868–950. Persoonia - Molecular Phylogeny and Evolution of Fungi 42(1):291−473

doi: 10.3767/persoonia.2019.42.11
[85]

Huang DY, Nong XH, Zhang YQ, Xu W, Sun LY, et al. 2022. Two new 2,5-diketopiperazine derivatives from mangrove-derived endophytic fungus Nigrospora camelliae-sinensis S30. Natural Product Research 36(14):3651−3656

doi: 10.1080/14786419.2021.1878168
[86]

Zhang SY, Li JF, Jiang HB, Ye S, Mapook A, et al. 2025. The polyphasic approach reveals two new species and two new records of Nigrospora (Apiosporaceae, Amphisphaeriales) associated with Aquilaria sinensis from China. MycoKeys 121:1−20

doi: 10.3897/mycokeys.121.154055
[87]

de Silva NI, Maharachchikumbura SSN, Thambugala KM, Bhat DJ, Karunarathna SC, et al. 2021. Morpho-molecular taxonomic studies reveal a high number of endophytic fungi from Magnolia candolli and M. garrettii in China and Thailand. Mycosphere 12(1):163−237

doi: 10.5943/mycosphere/12/1/3
[88]

Lee DJ, Lee JS, Lee HB, Choi YJ. 2019. Four endophytic ascomycetes new to Korea: Cladosporium anthropophilum, C. pseudocladosporioides, Daldinia eschscholtzii, and Nigrospora chinensis. The Korean Journal of Mycology 47(3):187−197

doi: 10.4489/KJM.20190023
[89]

Qin S, Chen X, Zhou X, Zhao J, Baccelli I, et al. 2021. First report of Camellia oleifera leaf blight caused by Nigrospora chinensis. Journal of Plant Pathology 103(2):711−712

doi: 10.1007/s42161-021-00793-6
[90]

Zhong J, Sui WW, Li P, Tang QJ, Liu TB, et al. 2022. Characterization of a novel victorivirus from Nigrospora chinensis, a fungus isolated from tobacco. Archives of Virology 167(12):2851−2855

doi: 10.1007/s00705-022-05619-z
[91]

Guo Q, Zeng Y, Jiang YL. 2024. First report of Nigrospora chinensis Causing Dragon Fruit (Selenicereus monacanthus) stem spot in China. Plant Disease 108(7):1409−1410

doi: 10.1094/PDIS-02-24-0485-PDN
[92]

Wang B, He B, Zuo C, Li Y, Chen P, et al. 2024. Microbial biotransformation of 1-Methyl-L-tryptophan into herbicidal indole alkaloids by endophytic fungus Nigrospora chinensis GGY-3. The Journal of Organic Chemistry 89(18):13359−13366

doi: 10.1021/acs.joc.4c01514
[93]

Karimi O, Hyde KD, Asghari R, Chethana KWT, Kaewchai S, et al. 2025. Peat swamp Ascomycota associated with palms (Arecaceae) from Narathiwat, Thailand. Mycosphere 16(1):2456−2575

doi: 10.5943/mycosphere/16/1/14
[94]

Kee YJ, Hafifi ABM, Huda-Shakirah AR, Wong KL, Jin XL, et al. 2019. First report of reddish brown spot disease of red-fleshed dragon fruit (Hylocereus polyrhizus) caused by Nigrospora lacticolonia and Nigrospora sphaerica in Malaysia. Crop Protection 122:165−170

doi: 10.1016/j.cropro.2019.05.006
[95]

Al-Nadabi H, Maharachchikumbura SSN, Al-Gahaffi ZS, Al-Hasani AS, Velazhahan R, et al. 2020. Molecular identification of fungal pathogens associated with leaf spot disease of date palms (Phoenix dactylifera). All Life 13(1):587−597

doi: 10.1080/26895293.2020.1835740
[96]

Hassan HS, Mohamed AA, Feleafel MN, Salem MZM, Ali HM, et al. 2021. Natural plant extracts and microbial antagonists to control fungal pathogens and improve the productivity of zucchini (Cucurbita pepo L.) In Vitro and in greenhouse. Horticulturae 7(11):470

doi: 10.3390/horticulturae7110470
[97]

Li M, Gao Z, Wang Y, Zhang W, Yang J, et al. 2022. First report of Nigrospora lacticolonia causing leaf spot of Bougainvillea spectabilis in China. Canadian Journal of Plant Pathology 44(5):695−701

doi: 10.1080/07060661.2022.2067245
[98]

de Queiroz Brito AC, de Mello JF, de Almeida Souza AE, dos Santos Nascimento S, de Souza-Motta CM, et al. 2023. Richness of Nigrospora spp. (Apiosporaceae) in Manihot esculenta in Brazil and the description of three new species. Mycological Progress 22:37

doi: 10.1007/s11557-023-01887-4
[99]

Lee W, Kim DG, Perera RH, Kim JS, Cho Y, et al. 2023. Diversity of Nigrospora (Xylariales, Apiosporaceae) species identified in Korean macroalgae including five unrecorded species. Mycobiology 51(6):401−409

doi: 10.1080/12298093.2023.2283272
[100]

Safi A, Mehrabi-Koushki M, Arzanlou M. 2024. Endophytic species of Nigrospora from grasses and shrubs of shadegan international wetland, with new species and records from Iran. Antonie Van Leeuwenhoek 117(1):77

doi: 10.1007/s10482-024-01976-8
[101]

Somteds A, Suebrasri T, Boonlue S, Patrick BO, Kanokmedhakul S, et al. 2025. Nigrosporinol sulfoxides A and B, sulfur-bridged heterocyclic sesquiterpenoids produced by cultures of the fungus Nigrospora lacticolonia. Organic Letter 27(1):288−291

doi: 10.1021/acs.orglett.4c04304
[102]

Tian XG, Bao DF, Karunarathna SC, Jayawardena RS, Hyde KD, et al. 2024. Taxonomy and phylogeny of ascomycetes associated with selected economically important monocotyledons in China and Thailand. Mycosphere 15(1):1−274

doi: 10.5943/mycosphere/15/1/1
[103]

Bao DF, Zhang JY, Lu YZ, Tian XG, Hyde KD, et al. 2025. Endophytic fungi associated with medicinal ferns in Guizhou Province, China I: Morpho-molecular characterization of culturable endophytic fungi associated with Dicranopteris spp. Mycosphere 16(1):2259−2455

doi: 10.5943/mycosphere/16/1/13
[104]

Chen XYL, Zhang C, Yang H, Yang MF, Cernava T. 2020. First report of leaf spot on Chenopodium album caused by Nigrospora pyriformis in China. Plant Disease 104(6):1872

doi: 10.1094/PDIS-07-19-1369-PDN
[105]

Gong X, Li Y, Zheng X, Zhang L, Sun X, et al. 2023. Leaf vein disease in Nelumbo nucifera caused by Nigrospora pyriformis infection in China. Plant Disease 107(2):567

doi: 10.1094/PDIS-04-22-0925-PDN
[106]

Hao YY, Aluthmuhandiram JVS, Chethana KWT, Manawasinghe IS, Li XH, et al. 2020. Nigrospora species associated with various hosts from Shandong Peninsula, China. Mycobiology 48(3):169−183

doi: 10.1080/12298093.2020.1761747
[107]

Raza M, Zhang ZF, Hyde KD, Diao YZ, Cai L. 2019. Culturable plant pathogenic fungi associated with sugarcane in southern China. Fungal Diversity 99(1):1−104

doi: 10.1007/s13225-019-00434-5
[108]

Barna B, Caldas LA, Monteiro J, dos Santos AL, Pascon RC, et al. 2025. Endophytic fungi of Calea pinnatifida (Asteraceae): dereplication of crude extracts, antimicrobial properties, and identification of new tetronic acid derivative produced by Hypomontagnella barbarensis. Journal of Fungi 11(1):22

doi: 10.3390/jof11010022
[109]

Almeida TRP, Coelho IL, Vasconcelos LSB, Silva EFM, Barros LR, et al. 2023. First report of Nigrospora vesicularifera causing foot rot on sweet potato in Brazil. Crop Protection 166(1):106171

doi: 10.1016/j.cropro.2022.106171
[110]

Li WL, Dissanayake AJ, Zhang T, Maharachchikumbura SSN, Liu JK. 2022. Identification and pathogenicity of pestalotiod fungi associated with woody oil plants in sichuan province, China. Journal of Fungi 8(11):1175

doi: 10.3390/jof8111175
[111]

Ariyawansa HA, Hyde KD, Jayasiri SC, Buyck B, Chethana KWT, et al. 2015. Fungal diversity notes 111–252—taxonomic and phylogenetic contributions to fungal taxa. Fungal Diversity 75(1):27−274

doi: 10.1007/s13225-015-0346-5
[112]

Huanaluek N, Jayawardena RS, Maharachchikumbura SSN, Harishchandra DL. 2021. Additions to pestalotioid fungi in Thailand: Neopestalotiopsis hydeana sp. nov. and Pestalotiopsis hydei sp. nov. Phytotaxa 479(1):23−43

doi: 10.11646/phytotaxa.479.1.2
[113]

Carvalho DDC, Oliveira RM, Marques MG, Milan MD, Pinho DB, et al. 2019. Molecular, morphophysiological and pathogenic characterization of eucalypt Pestalotiopsis grandis-urophylla isolates, a new species. Tropical Plant Pathology 44:132−139

doi: 10.1007/s40858-019-00277-0
[114]

Sun YR, Jayawardena RS, Sun JE, Wang Y. 2023. Pestalotioid species associated with medicinal plants in southwest China and Thailand. Microbiology Spectrum 11(1):e0398722

doi: 10.1128/spectrum.03987-22
[115]

Jiang N, Voglmayr H, Ma CY, Xue H, Piao CG, et al. 2022. A new Arthrinium-like genus of Amphisphaeriales in China. MycoKeys 92:27−43

doi: 10.3897/mycokeys.92.86521
[116]

Han LS, Liu C, Dai DQ, Promputtha I, Elgorban AM, et al. 2024. Five new species, two new sexual morph reports, and one new geographical record of Apiospora (Amphisphaeriales, Sordariomycetes) isolated from bamboo in Yunnan, China. Frontiers in Cellular and Infection Microbiology 14:1476066

doi: 10.3389/fcimb.2024.1476066
[117]

Mapook A, Hyde KD, McKenzie EHC, Jones EBG, Bhat DJ, et al. 2020. Taxonomic and phylogenetic contributions to fungi associated with the invasive weed Chromolaena odorata (Siam weed). Fungal Diversity 101(1):1−175

doi: 10.1007/s13225-020-00444-8
[118]

Habib K, Wh L, Yl R, Ll L, Ct L, et al. 2025. Exploration of ascomycetous fungi revealing novel taxa in southwestern China. Mycosphere 16(1):1412−1529

doi: 10.5943/mycosphere/16/1/9
[119]

Liu XF, Tibpromma S, Hughes AC, Chethana KWT, Wijayawardene NN, et al. 2023. Culturable mycota on bats in central and southern Yunnan Province, China. Mycosphere 14(1):497−662

doi: 10.5943/mycosphere/14/1/7
[120]

Li D, Zhang M, Zhang J, Ma L, Zhang Z, et al. 2024. Three new microfungi (Ascomycota) species from southern China. MycoKeys 111:87−110

doi: 10.3897/mycokeys.111.136483
[121]

Zimmerman A. 1902. Ueber einige an tropischen Kulturpflanzen beobachtete Pilze III. Zentralblatt für Bakteriologie Parasitenkunde 8:216−221 (in German)

[122]

Zou M, Al-Otibi F, Hyde KD, Wang Y, Pan XJ. 2024. New Helminthosporium (Massarinaceae, Dothideomycetes) and Nigrospora (Incertae sedis, Sordariomycetes) species associated with walnut (Juglans regia L.) in China. MycoKeys 109(1):265−284

doi: 10.3897/mycokeys.109.133431
[123]

Tan YP, Shivas RG. 2024. Nomenclatural novelties. Index of Australian Fungi 39:1−9

[124]

Chen Q, Bakhshi M, Balci Y, Broders KD, Cheewangkoon R, et al. 2022. Genera of phytopathogenic fungi: GOPHY 4. Studies in Mycology 101:417−564

doi: 10.3114/sim.2022.101.06
[125]

Tan YP, Bishop-Hurley SL, Shivas RG, Cowan DA, Maggs-Kolling G, et al. 2022. Fungal planet description sheets: 1436–1477. Persoonia - Molecular Phylogeny and Evolution of Fungi 49:261−350

doi: 10.3767/persoonia.2022.49.08
[126]

Wang J, Liu ZX, Yu W, Kang C, Yang YH. 2024. A new species of Nigrospora (Apiosporaceae) in Corylus heterophylla in China. Turkish Journal of Botany 48(5):274−282

doi: 10.55730/1300-008x.2815
[127]

Lin CG, Hyde KD, Lumyong S, McKenzie EHC. 2017. Beltrania-like taxa from Thailand. Cryptogamie, Mycologie 38(3):301−319

doi: 10.7872/crym/v38.iss3.2017.301
[128]

Hyde KD, de Silva NI, Jeewon R, Bhat DJ, Phookamsak R, et al. 2020. AJOM new records and collections of fungi: 1–100. Asian Journal of Mycology 3(1):22−294

doi: 10.5943/ajom/3/1/3
[129]

Subramanian CV. 1952. Fungi imperfecti from Madras—III. Proceedings / Indian Academy of Sciences 36:223−228

doi: 10.1007/bf03050466
[130]

Shirouzu T, Hirose D, Tokumasu S, To-Anun C, Maekawa N. 2010. Host affinity and phylogenetic position of a new anamorphic fungus Beltraniella botryospora from living and fallen leaves of evergreen oaks. Fungal Diversity 43(1):85−92

doi: 10.1007/s13225-010-0037-1
[131]

Tan YP, Shivas RG. 2022. Nomenclatural novelties. Index of Australian Fungi 3:1−21

[132]

Vu D, Groenewald M, de Vries M, Gehrmann T, Stielow B, et al. 2019. Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation. Studies in Mycology 92(1):135−154

doi: 10.1016/j.simyco.2018.05.001
[133]

Bezerra JDP, Machado AR, Firmino AL, Rosado AWC, Souza CAF, et al. 2018. Mycological diversity description I. Acta Botanica Brasilica 32(4):656−666

doi: 10.1590/0102-33062018abb0154
[134]

Jiang N, Voglmayr H, Xue H, Piao CG, Li Y. 2022. Morphology and phylogeny of Pestalotiopsis (Sporocadaceae, Amphisphaeriales) from fagaceae leaves in China. Microbiology Spectrum 10(6):e0327222

doi: 10.1128/spectrum.03272-22
[135]

Song Y, Tangthirasunun N, Maharachchikumbura SSN, Jiang Y, Xu J, et al. 2014. Novel Pestalotiopsis species from Thailand point to the rich undiscovered diversity of this chemically creative genus. Cryptogamie, Mycologie 35(2):139−149

doi: 10.7872/crym.v35.iss2.2014.139
[136]

Hyde KD, Norphanphoun C, Ma J, Yang HD, Zhang JY, et al. 2023. Mycosphere notes 387–412 – novel species of fungal taxa from around the world. Mycosphere 14(1):663−744

doi: 10.5943/mycosphere/14/1/8
[137]

Li LL, Yang Q, Li H. 2021. Morphology, phylogeny, and pathogenicity of pestalotioid species on Camellia oleifera in China. Journal of Fungi 7(12):1080

doi: 10.3390/jof7121080
[138]

Luo XX, Liao MG, Zhang K, Castaneda-Ruiz RF, Ma J, et al. 2024. Morphological and phylogenetic analyses reveal eight novel species of Pestalotiopsis (Sporocadaceae, Amphisphaeriales) from southern China. MycoKeys 109:207−238

doi: 10.3897/mycokeys.109.131000
[139]

Liu F, Hou L, Raza M, Cai L. 2017. Pestalotiopsis and allied genera from Camellia, with description of 11 new species from China. Scientific Reports 7(1):866

doi: 10.1038/s41598-017-00972-5
[140]

Wang QC, Zhan ZJ, Sattar A, Wang HN, Zhou LF, et al. 2025. Pestalotiopsis (Amphisphaeriales, Sporocadaceae) species including six new taxa inhabiting pines from different climate zones in China. IMA Fungus 16:e151614

doi: 10.3897/imafungus.16.151614
[141]

Nozawa S, Ando K, Phay N, Watanabe K. 2018. Pseudopestalotiopsis dawaina sp. nov. and Ps. kawthaungina sp. nov.: two new species from Myanmar. Mycological Progress 17(7):865−870

doi: 10.1007/s11557-018-1398-1
[142]

Perera RH, Maharachchikumbura SSN, Jones EBG, Bahkali AH, Elgorban AM, et al. 2017. Delonicicola siamense gen. & sp. nov. (Delonicicolaceae fam. nov., Delonicicolales ord. nov.), a saprobic species from Delonix regia seed pods. Cryptogamie, Mycologie 38(3):321−340

doi: 10.7872/crym/v38.iss3.2017.321
[143]

Crous PW, Luangsa-Ard JJ, Wingfield MJ, Carnegie AJ, Hernandez-Restrepo M, et al. 2018. Fungal planet description sheets: 785–867. Persoonia - Molecular Phylogeny and Evolution of Fungi 41(1):238−417

doi: 10.3767/persoonia.2018.41.12
[144]

Gerin D, Nigro F, Faretra F, Pollastro S. 2020. Identification of Arthrinium marii as causal agent of olive tree dieback in apulia (Southern Italy). Plant Disease 104(3):694−701

doi: 10.1094/PDIS-03-19-0569-RE
[145]

Lo Piccolo S, Mondello V, Giambra S, Conigliaro G, Torta L, et al. 2013. Arthrinium phaeospermum, Phoma cladoniicola and Ulocladium consortiale, new olive pathogens in Italy. Journal of Phytopathology 162(4):258−263

doi: 10.1111/jph.12179
[146]

Shrestha P, Ibanez AB, Bauer S, Glassman SI, Szaro TM, et al. 2015. Fungi isolated from Miscanthus and sugarcane: biomass conversion, fungal enzymes, and hydrolysis of plant cell wall polymers. Biotechnology for Biofuels 8(1):38

doi: 10.1186/s13068-015-0221-3
[147]

Waner JL. 1994. Mixed viral infections: detection and management. Clinical Microbiology Reviews 7(2):143−151

doi: 10.1128/cmr.7.2.143
[148]

Tarashi S, Fateh A, Mirsaeidi M, Siadat SD, Vaziri F. 2017. Mixed infections in tuberculosis: the missing part in a puzzle. Tuberculosis (Edinb) 107:168−174

doi: 10.1016/j.tube.2017.09.004
[149]

Strauss AT, Bowerman L, Porath-Krause A, Seabloom EW, Borer ET. 2021. Mixed infection, risk projection, and misdirection: interactions among pathogens alter links between host resources and disease. Ecology and Evolution 11(14):9599−9609

doi: 10.1002/ece3.7781
[150]

Zhang Y, Chen C, Mai Z, Lin J, Nie L, et al. 2022. Co-infection of Fusarium aglaonematis sp. nov. and Fusarium elaeidis Causing Stem Rot in Aglaonema modestum in China. Frontiers in Microbiology 13:930790

doi: 10.3389/fmicb.2022.930790
[151]

Han SL, Wang MM, Ma ZY, Raza M, Zhao P, et al. 2023. Fusarium diversity associated with diseased cereals in China, with an updated phylogenomic assessment of the genus. Studies in Mycology 104:87−148

doi: 10.3114/sim.2022.104.02
[152]

Vayssier-Taussat M, Kazimirova M, Hubalek Z, Hornok S, Farkas R, et al. 2015. Emerging horizons for tick-borne pathogens: from the 'one pathogen–one disease' vision to the pathobiome paradigm. Future Microbiology 10(12):2033−2043

doi: 10.2217/fmb.15.114
[153]

Bass D, Stentiford GD, Wang HC, Koskella B, Tyler CR. 2019. The pathobiome in animal and plant diseases. Trends in Ecology & Evolution 34(11):996−1008

doi: 10.1016/j.tree.2019.07.012
[154]

Alvarez-Loayza P, White JF, Torres MS, Balslev H, Kristiansen T, et al. 2011. Light converts endosymbiotic fungus to pathogen, influencing seedling survival and niche-space filling of a common tropical tree, Iriartea deltoidea. PLoS One 6(1):e16386

doi: 10.1371/journal.pone.0016386
[155]

Van Kan JA, Shaw MW, Grant-Downton RT. 2014. Botrytis species: relentless necrotrophic thugs or endophytes gone rogue? Molecular Plant Pathology 15(9):957−961

doi: 10.1111/mpp.12148
[156]

Hill R, Buggs RJA, Vu DT, Gaya E. 2022. Lifestyle transitions in fusarioid fungi are frequent and lack clear genomic signatures. Molecular Biology and Evolution 39(4):msac085

doi: 10.1093/molbev/msac085
[157]

Varga E, Wiesenberger G, Hametner C, Ward TJ, Dong Y, et al. 2015. New tricks of an old enemy: isolates of Fusarium graminearum produce a type A trichothecene mycotoxin. Environmental Microbiology 17(8):2588−2600

doi: 10.1111/1462-2920.12718
[158]

Lofgren LA, LeBlanc NR, Certano AK, Nachtigall J, LaBine KM, et al. 2018. Fusarium graminearum: pathogen or endophyte of North American grasses? New Phytologist 217(3):1203−1212

doi: 10.1111/nph.14894
[159]

Boutigny A-L, Ward TJ, Van Coller GJ, Flett B, Lamprecht SC, et al. 2011. Analysis of the Fusarium graminearum species complex from wheat, barley and maize in South Africa provides evidence of species-specific differences in host preference. Fungal Genetics and Biology 48(9):914−920

doi: 10.1016/j.fgb.2011.05.005
[160]

Boutigny A-L, Ward TJ, Ballois N, Iancu G, Ioos R. 2014. Diversity of the Fusarium graminearum species complex on french cereals. European Journal of Plant Pathology 138(1):133−148

doi: 10.1007/s10658-013-0312-6
[161]

Ma LJ. 2014. Horizontal chromosome transfer and rational strategies to manage Fusarium vascular wilt diseases. Molecular Plant Pathology 15(8):763−766

doi: 10.1111/mpp.12171
[162]

Vlaardingerbroek I, Beerens B, Rose L, Fokkens L, Cornelissen BJC, et al. 2016. Exchange of core chromosomes and horizontal transfer of lineage-specific chromosomes in Fusarium oxysporum. Environmental Microbiology 18(11):3702−3713

doi: 10.1111/1462-2920.13281
[163]

Simbaqueba J, Catanzariti AM, Gonzalez C, Jones DA. 2018. Evidence for horizontal gene transfer and separation of effector recognition from effector function revealed by analysis of effector genes shared between cape gooseberry- and tomato-infecting formae speciales of Fusarium oxysporum. Molecular Plant Pathology 19(10):2302−2318

doi: 10.1111/mpp.12700
[164]

Susi H, Barres B, Vale PF, Laine AL. 2015. Co-infection alters population dynamics of infectious disease. Nature Communications 6:5975

doi: 10.1038/ncomms6975
[165]

Liu SG, García-Palacios P, Tedersoo L, Guirado E, van der Heijden MGA, et al. 2022. Phylotype diversity within soil fungal functional groups drives ecosystem stability. Nature Ecology & Evolution 6(7):900−909

doi: 10.1038/s41559-022-01756-5
[166]

Cui XF, Hao ZG, Chen MH, Song S, Zhang JN,. 2024. Identification and pathogenicity of pestalotioid species on Alpinia oxyphylla in Hainan Province, China. Journal of Fungi 10(6):371

doi: 10.3390/jof10060371
[167]

Heng ZA, Mu TC, Keyhani NO, Yang LX, Zheng MH, et al. 2025. Three new species of Neopestalotiopsis and Pseudopestalotiopsis (Sporocadaceae, Amphisphaeriales) associated with shrub leaf diseases from Fujian, China. MycoKeys 119:1−28

doi: 10.3897/mycokeys.119.148647
[168]

Bawono P, Heringa J. 2014. Phylogenetic analyses. In Comprehensive Biomedical Physics, ed. Brahme A. Oxford: Elsevier. pp. 93–110

[169]

Sahu N, Indic B, Wong-Bajracharya J, Merényi Z, Ke H-M, et al. 2023. Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria. Nature Microbiology 8(9):1668−1681

doi: 10.1038/s41564-023-01448-1
[170]

Olsen GJ. 2013. Parsimony. In Brenner’s Encyclopedia of Genetics, eds. Maloy S, Hughes K. London, UK: Academic Press. pp. 229–232