-
Figure 1.
Genetic improvement of multiple traits in forage grasses.
-
Species Assembly size (Gb) Contig N50 (kb) Genome coverage* Sequencing method Ref. Oat (A. atlantica Cc 7277) 3.69 513,200 84x PacBio and Illumina [16] Oat (A. eriantha CN 19328) 3.78 534,800 71x PacBio and Illumina [16] Hexaploid oat (Sanfensan) 10.76 75,273 100x Oxford Nanopore, Hi-C and Illumina [17] Diploid oat (A. longiglumis, CN 58139) 3.74 7,298 60x Oxford Nanoporeand Illumina [17] Tetraploid oat (A. insularis, CN 108634) 7.52 5,637 60x Oxford Nanopore, Hi-C and Illumina [17] Perennial ryegrass(P226/135/16) 1.13 70 9x PacBio and Illumina [18] Heterozygous Italian ryegrass (M2289) 0.586 5 28x Illumina [19] Perennial ryegrass (Kyuss) 2.28 11,740 70x Oxford Nanoporeand Illumina [20] Heterozygous Italian ryegrass (Rabiosa) 4.53 3,050 500x NRGene and Illumina [21] Perennial ryegrass (P226/135/16) 2.55 1074 81x PacBio, Illumina,BioNano and Hi-C [22] Sheepgrass (Lc6-5) 7.85 318,490 115x PacBio, Hi-Cand Illumina [23] Switchgrass (Alamo, tetraploid) 1.13 5,461 121x PacBioand Illumina [26] * Represents the highest genome coverage of all the sequencing methods. Table 1.
Genome information of oat, ryegrass, switchgrass, and sheepgrass.
-
Species* Type of donors Gene transfer method Methodologies for improving transformation efficiency Oat[41] Seed induced embryogenic calli Agrobacterium mediated High quality embryogenic calli induction, vacuum, and sonication Oat[41] Leaf base induced embryogenic calli Agrobacterium mediated High quality embryogenic calli induction, vacuum, and sonication Perennial ryegrass[52] Seed induced embryogenic calli Agrobacterium mediated High quality embryogenic calli induction, cold shock,
L-Gln, addition, and myo-inositol removalPerennial ryegrass[42] Seed induced embryogenic calli Agrobacterium mediated High quality embryogenic calli induction and heat shock Perennial ryegrass[42] Shoot meristem tips Agrobacterium mediated Sonication Perennial ryegrass[53] Seeds induced embryogenic calli Particle bombardment High quality embryogenic calli induction Perennial ryegrass[54] Calli induced from shoot tips, seeds, and anthers Agrobacterium mediated High quality embryogenic calli induction Sheepgrass[43,45] Seed/inflorescence induced embryogenic calli Agrobacterium mediated High quality embryogenic calli induction and co-expressing wheat TaWOX5 Switchgrass[37,44,46] Seed/inflorescence induced embryogenic calli Agrobacterium mediated High quality embryogenic calli induction, vacuum, and
co-expressing maize ZmBbm and ZmWus2Switchgrass[55] Embryogenic cell suspension cultures Agrobacterium mediated Establishment of regenerable embryogenic cell suspension cultures Switchgrass[56] Inflorescence induced embryogenic calli Agrobacterium mediated Engineering A. tumefaciens to express a T3SS * Refers to all cited representive references from the last ten years. Table 2.
Transformation systems of oat, perennial ryegrass, sheepgrass, and switchgrass.
Figures
(1)
Tables
(2)