| [1] |
Liu B, Asseng S, Liu L, Tang L, Cao W, et al. 2016. Testing the responses of four wheat crop models to heat stress at anthesis and grain filling. |
| [2] |
UNESCO World Water Assessment Programme. 2019. Leaving No One Behind. The United Nations World Water Development Report 2019. Paris, France: UNESCO on behalf of UN-Water. https://unesdoc.unesco.org/ark:/48223/pf0000367306_eng |
| [3] |
Shrivastava P, Kumar R. 2015. Soil salinity: A serious environmental issue and plant growth promoting bacteria as one of the tools for its alleviation. |
| [4] |
El-Hendawy SE, Hassan WM, Al-Suhaibani NA, Refay Y, Abdella KA. 2017. Comparative performance of multivariable agro-physiological parameters for detecting salt tolerance of wheat cultivars under simulated saline field growing conditions. |
| [5] |
Kumar P, Choudhary M, Halder T, Prakash NR, Singh V, et al. 2022. Salinity stress tolerance and omics approaches: revisiting the progress and achievements in major cereal crops. |
| [6] |
Hussein MM, Balbaa LK, Gaballah MS. 2007. Salicylic Acid and Salinity Effects on Growth of Maize Plants. Research Journal of Agriculture and Biological Sciences 3:321−28 |
| [7] |
Snowdon RJ, Wittkop B, Chen TW, Stahl A. 2021. Crop adaptation to climate change as a consequence of long-term breeding. |
| [8] |
Lenaerts B, Collard BCY, Demont M. 2019. Review: Improving global food security through accelerated plant breeding. |
| [9] |
Scheben A, Edwards D. 2017. Genome editors take on crops. |
| [10] |
Fernie AR, Bachem CWB, Helariutta Y, Neuhaus HE, Prat S, et al. 2020. Synchronization of developmental, molecular and metabolic aspects of source-sink interactions. |
| [11] |
Yan H, Jin Y, Yu H, Wang C, Wu B, et al. 2024. Genomic selection for agronomical phenotypes using genome-wide SNPs and SVs in pearl millet. |
| [12] |
Yan H, Sun M, Zhang Z, Jin Y, Zhang A, et al. 2023. Pangenomic analysis identifies structural variation associated with heat tolerance in pearl millet. |
| [13] |
Pucher A, Sy O, Angarawai II, Gondah J, Zangre R, et al. 2015. Agro-morphological characterization of west and central African pearl millet accessions. |
| [14] |
Bhattarai B, Singh S, West CP, Ritchie GL, Trostle CL. 2020. Water depletion pattern and water use efficiency of forage sorghum, pearl millet, and corn under water limiting condition. |
| [15] |
Hassan K, Abd El-Maaboud M, Draz M, El Shaer H. 2016. Performance of sorghum and pearl millet forage crops productivity by using different agricultural managements under salinity conditions. |
| [16] |
Sun M, Huang D, Zhang A, Khan I, Yan H, et al. 2020. Transcriptome analysis of heat stress and drought stress in pearl millet based on Pacbio full-length transcriptome sequencing. |
| [17] |
Ashraf M, Hafeez M. 2004. Thermotolerance of pearl millet and maize at early growth stages: growth and nutrient relations. |
| [18] |
Jha DK, Chanwala J, Barla P, Dey N. 2024. "Genome-wide identification of bZIP gene family in Pearl millet and transcriptional profiling under abiotic stress, phytohormonal treatments; and functional characterization of PgbZIP9". |
| [19] |
Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. |
| [20] |
Bray NL, Pimentel H, Melsted P, Pachter L. 2016. Near-optimal probabilistic RNA-seq quantification. |
| [21] |
Soneson C, Love MI, Robinson MD. 2015. Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences. |
| [22] |
Wang L, Feng Z, Wang X, Wang X, Zhang X. 2010. DEGseq: an R package for identifying differentially expressed genes from RNA-seq data. |
| [23] |
Buchfink B, Xie C, Huson DH. 2015. Fast and sensitive protein alignment using DIAMOND. |
| [24] |
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. |
| [25] |
Finn RD, Clements J, Arndt W, Miller BL, Wheeler TJ, et al. 2015. HMMER web server: 2015 update. |
| [26] |
Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, et al. 2005. Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. |
| [27] |
Kanehisa M, Goto S. 2000. KEGG: kyoto encyclopedia of genes and genomes. |
| [28] |
Zheng Y, Jiao C, Sun H, Rosli HG, Pombo MA, et al. 2016. iTAK: a program for genome-wide prediction and classification of plant transcription factors, transcriptional regulators, and protein kinases. |
| [29] |
Young MD, Wakefield MJ, Smyth GK, Oshlack A. 2010. Gene ontology analysis for RNA-seq: accounting for selection bias. |
| [30] |
Bu D, Luo H, Huo P, Wang Z, Zhang S, et al. 2021. KOBAS-i: intelligent prioritization and exploratory visualization of biological functions for gene enrichment analysis. |
| [31] |
Huang D, Sun M, Zhang A, Chen J, Zhang J, et al. 2021. Transcriptional changes in pearl millet leaves under heat stress. |
| [32] |
Li B, Gao Z, Liu X, Sun D, Tang W. 2019. Transcriptional profiling reveals a time-of-day-specific role of REVEILLE 4/8 in regulating the first wave of heat shock-induced gene expression in arabidopsis. |
| [33] |
Dahuja A, Kumar RR, Sakhare A, Watts A, Singh B, et al. 2021. Role of ATP-binding cassette transporters in maintaining plant homeostasis under abiotic and biotic stresses. |
| [34] |
Kavi Kishor PB, Tiozon RN, Fernie AR, Sreenivasulu N. 2022. Abscisic acid and its role in the modulation of plant growth, development, and yield stability. |
| [35] |
Pantin F, Monnet F, Jannaud D, Costa JM, Renaud J, et al. 2013. The dual effect of abscisic acid on stomata. |
| [36] |
Chen K, Li GJ, Bressan RA, Song CP, Zhu JK, et al. 2020. Abscisic acid dynamics, signaling, and functions in plants. |
| [37] |
Audran C, Liotenberg S, Gonneau M, North H, Frey A, et al. 2001. Localisation and expression of zeaxanthin epoxidase mRNA in Arabidopsis in response to drought stress and during seed development. |
| [38] |
Muhammad Aslam M, Waseem M, Jakada BH, Okal EJ, Lei Z, et al. 2022. Mechanisms of abscisic acid-mediated drought stress responses in plants. |
| [39] |
González-Guzmán M, Apostolova N, Bellés JM, Barrero JM, Piqueras P, et al. 2002. The short-chain alcohol dehydrogenase ABA2 catalyzes the conversion of xanthoxin to abscisic aldehyde. |
| [40] |
Manna M, Thakur T, Chirom O, Mandlik R, Deshmukh R, et al. 2021. Transcription factors as key molecular target to strengthen the drought stress tolerance in plants. |
| [41] |
Heilmann M, Heilmann I. 2022. Regulators regulated: different layers of control for plasma membrane phosphoinositides in plants. |
| [42] |
Park D, Jeong S, Lee S, Park S, Kim JI, et al. 2000. Molecular characterization of Drosophila melanogaster myo-inositol-1-phosphate synthase. |
| [43] |
McAllister G, Whiting P, Hammond EA, Knowles MR, Atack JR, et al. 1992. cDNA cloning of human and rat brain myo-inositol monophosphatase. |
| [44] |
Munnik T, Vermeer JEM. 2010. Osmotic stress-induced phosphoinositide and inositol phosphate signalling in plants. |
| [45] |
Sbrissa D, Ikonomov OC, Deeb R, Shisheva A. 2002. Phosphatidylinositol 5-phosphate biosynthesis is linked to PIKfyve and is involved in osmotic response pathway in mammalian cells. |
| [46] |
Castañeda-Álvarez NP, Khoury CK, Achicanoy HA, Bernau V, Dempewolf H, et al. 2016. Global conservation priorities for crop wild relatives. |
| [47] |
Oshunsanya SO, Nwosu NJ, Li Y. 2019. Abiotic stress in agricultural crops under climatic conditions. In Sustainable Agriculture, Forest and Environmental Management, eds. Jhariya MK, Banerjee A, Meena RS, Yadav DK. Singapore: Springer. pp. 71–100. doi: 10.1007/978-981-13-6830-1_3 |
| [48] |
Philippe G, Sørensen I, Jiao C, Sun X, Fei Z, et al. 2020. Cutin and suberin: assembly and origins of specialized lipidic cell wall scaffolds. |
| [49] |
Bhanot V, Fadanavis SV, Panwar J. 2021. Revisiting the architecture, biosynthesis and functional aspects of the plant cuticle: There is more scope. |
| [50] |
Benítez JJ, González Moreno A, Guzmán-Puyol S, Heredia-Guerrero JA, Heredia A, et al. 2021. The response of tomato fruit cuticle membranes against heat and light. |
| [51] |
Höfer R, Briesen I, Beck M, Pinot F, Schreiber L, et al. 2008. The Arabidopsis cytochrome P450 CYP86A1 encodes a fatty acid ω-hydroxylase involved in suberin monomer biosynthesis. |
| [52] |
Krolikowski KA, Victor JL, Wagler TN, Lolle SJ, Pruitt RE. 2003. Isolation and characterization of the Arabidopsis organ fusion gene HOTHEAD. |
| [53] |
Moore CE, Meacham-Hensold K, Lemonnier P, Slattery RA, Benjamin C, et al. 2021. The effect of increasing temperature on crop photosynthesis: from enzymes to ecosystems. |
| [54] |
Higgins CF. 1992. ABC transporters: from microorganisms to man. |
| [55] |
Kuromori T, Miyaji T, Yabuuchi H, Shimizu H, Sugimoto E, et al. 2010. ABC transporter AtABCG25 is involved in abscisic acid transport and responses. |
| [56] |
Takahashi S, Badger MR. 2011. Photoprotection in plants: a new light on photosystem II damage. |
| [57] |
Jia W, Zhang J. 2008. Stomatal movements and long-distance signaling in plants. |
| [58] |
Pei ZM, Murata Y, Benning G, Thomine S, Klüsener B, et al. 2000. Calcium channels activated by hydrogen peroxide mediate abscisic acid signalling in guard cells. |
| [59] |
Ohama N, Sato H, Shinozaki K, Yamaguchi-Shinozaki K. 2017. Transcriptional regulatory network of plant heat stress response. |
| [60] |
Wi SJ, Ji NR, Park KY. 2012. Synergistic biosynthesis of biphasic ethylene and reactive oxygen species in response to hemibiotrophic Phytophthora parasitica in tobacco plants. |
| [61] |
Gong L, Liu XD, Zeng YY, Tian XQ, Li YL, et al. 2021. Stomatal morphology and physiology explain varied sensitivity to abscisic acid across vascular plant lineages. |
| [62] |
Mittler R, Vanderauwera S, Gollery M, van Breusegem F. 2004. Reactive oxygen gene network of plants. |
| [63] |
Han X, Yang Y. 2021. Phospholipids in salt stress response. |
| [64] |
Yang Y, Han X, Ma L, Wu Y, Liu X, et al. 2021. Dynamic changes of phosphatidylinositol and phosphatidylinositol 4-phosphate levels modulate H+-ATPase and Na+/H+ antiporter activities to maintain ion homeostasis in Arabidopsis under salt stress. |
| [65] |
Malinsky J, Opekarová M, Grossmann G, Tanner W. 2013. Membrane microdomains, rafts, and detergent-resistant membranes in plants and fungi. |
| [66] |
Xing J, Zhang L, Duan Z, Lin J. 2021. Coordination of Phospholipid-Based Signaling and Membrane Trafficking in Plant Immunity. |
| [67] |
Aniento F, Sánchez de Medina Hernández V, Dagdas Y, Rojas-Pierce M, Russinova E. 2022. Molecular mechanisms of endomembrane trafficking in plants. |
| [68] |
Mosesso N, Nagel MK, Isono E. 2019. Ubiquitin recognition in endocytic trafficking - with or without ESCRT-0. |
| [69] |
Thomas C, Tampé R. 2020. Structural and mechanistic principles of ABC transporters. |
| [70] |
Lee M, Choi Y, Burla B, Kim YY, Jeon B, et al. 2008. The ABC transporter AtABCB14 is a malate importer and modulates stomatal response to CO2. |
| [71] |
Zhou Y, Wang Y, Zhang D, Liang J. 2024. Endomembrane-biased dimerization of ABCG16 and ABCG25 transporters determines their substrate selectivity in ABA-regulated plant growth and stress responses. |
| [72] |
Kim DY, Jin JY, Alejandro S, Martinoia E, Lee Y. 2010. Overexpression of AtABCG36 improves drought and salt stress resistance in Arabidopsis. |
| [73] |
Shinde H, Tanaka K, Dudhate A, Tsugama D, Mine Y, et al. 2018. Comparative de novo transcriptomic profiling of the salinity stress responsiveness in contrasting pearl millet lines. |
| [74] |
Shinozaki K, Yamaguchi-Shinozaki K. 1997. Gene expression and signal transduction in water-stress response. |
| [75] |
Haider S, Iqbal J, Naseer S, Yaseen T, Shaukat M, et al. 2021. Molecular mechanisms of plant tolerance to heat stress: current landscape and future perspectives. |
| [76] |
Clough SJ, Fengler KA, Yu IC, Lippok B, Smith RK Jr., et al. 2000. The Arabidopsis dnd1 "defense, no death" gene encodes a mutated cyclic nucleotide-gated ion channel. |
| [77] |
Jeong S, Lim CW, Kim M, Lee SC. 2024. Modulation of phosphorylation status of MAP3 kinases under abiotic stress responses. |
| [78] |
Cutler SR, Rodriguez PL, Finkelstein RR, Abrams SR. 2010. Abscisic acid: emergence of a core signaling network. |
| [79] |
Singh VP, Jaiswal S, Wang Y, Feng S, Tripathi DK, et al. 2024. Evolution of reactive oxygen species cellular targets for plant development. |