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The MdSUMO2 RNAi transgenic apple plants were produced previously[6]. The tissue-cultured apple seedlings were cultured in Murashige and Skoog (MS) medium (4.43 g/L MS salts, 30 g/L sucrose, 0.2 mg/L 6-Benzylaminopurine [6-BA], 0.2 mg/L 3-Indoleacetic acid [IAA] and 7.5 g/L agar, pH 5.8) under long-day conditions (14 h light [cool white, ~100 umol/m2/s, T5 LED batten]: 10 h dark) for 4 weeks at 25 °C[32]. One month-old tissue-cultured apple seedlings were selected for rooting, and rooted on 1/2 MS medium containing 0.5 mg/L IAA and 0.5 mg/L indole butyric acid (IBA). When the tissue-cultured apple seedlings were rooted, the plants were transformed to a nutrient bowl containing substrate (Pindstrup, Denmark), and cultured in a growth chamber (16 h light: 8 h dark, 25 °C, ~55% relative humanity) for 30 d.
RNA extraction and qRT-PCR analysis
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RNA extraction was performed as described previously[33]. RNase-free DNase Ⅰ (Thermo Scientific, USA) was used to remove genomic DNA. After extracting total RNA, it was detected through agarose gel electrophoresis and UV spectrophotometer (Thermo Nanodrop 2000) for concentration determination. Then, 1 μg of RNA was reverse transcribed to synthesize cDNA by using reverse transcription kit HiScript II Q RT SuperMix for qPCR (+gDNA wiper) (Vazyme, R223-01, China). Quantitative reverse transcription PCR (qRT-PCR) analysis was carried out using a ChamQ Universal SYBR qPCR Master Mix (Vazyme, C601, China) on the CFX96 real-time system (Bio-Rad, USA). Primers used in this study are listed in Table 1.
Table 1. Sequences of primers used in this study.
Gene name Forward primer Reverse primer Purpose MdSUMO2C GCACAGAAGAAACCCCTGGAT CACTTCATTACCATCCTGCCCT qRT-PCR analysis MdSUMO2A GTGTTTGGAAGTGGTGGTAGCTC TCTTGTCCTCCTCCTGGTTCG qRT-PCR analysis MdSUMO2B CGACTCCGCAGCAAGAAGAG CTTCAGCTGAGTGCTTCGC qRT-PCR analysis MdSUMO2-RNAi GGGGACAAGTTTGTACAAAAAAGCAGGCTTC
TCAGGCGTCACGAACCAGGGGGGACCACTTTGTACAAGAAAGCTGGGTCGC
TGGGTACTTCTCTTGATCCTGAPlasmid construction of MdSUMO2 RNAi MdNRT1.1 ACGGGCACCACGCACTTG GGTTGGAGGCTGGGGACTG qRT-PCR analysis MdNRT1.2 TCCCTATCTTCCCCGTACTCTTC GGAGTTGGTCGCTACACGCT qRT-PCR analysis MdNRT2.5 CGTTCCACCTGTCTTGGTTTTC CGATGTCGCTGGCGGTTAG qRT-PCR analysis MdNR TGACGATAGCGTTGTCCAGG AGTGAGGCGGACCATTGAAG qRT-PCR analysis N deficiency treatment
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N deficiency treatment was performed as described previously[4]. Hydroponically-cultured plants were cultured in 1/2 Hoagland nutrient solution (1.75 mM Ca(NO3)2, 2.5 mM KNO3, 0.5 mM KH2PO4, 0.86 mM MgSO4, 100 μM EDTA-FeNa, 46.26 μM H3PO4, 9.15 μM MnCl2, 0.77 μM ZnSO4, 0.32 μM CuSO4, 0.5 μM H2MoO4). Hydroponic culture was chosen for three-month-old GL-3 and MdSUMO2 RNAi transgenic apple plants with identical growth conditions. After pre-culturing for about 10 d, the plants were in nitrogen starvation for 7 d and then divided into two groups with low and normal nitrogen solution (0.2 mM and 6 mM KNO3) with the same base nutrient medium. The two groups continued to grow in the nutrient solution for 30 d and the solution was refreshed every 3 d. Hydroponically-cultured GL-3 (three-month-old) were treated with normal (6 mM) or low nitrate (0.2 mM) for 4 d. Root samples were used for gene expression analysis[34].
Growth and root architecture measurements
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Twelve plants were measured for each genotype. The physiological indicators of the above-ground part, including new leaf number, height, stem diameter, and fresh weight. To obtain an accurate assessment of the root systems, the roots were meticulously cleansed without causing any damage. After flattening and spreading the roots, their images were captured using a SNAPSCAN 310 scanner, which allowed for high-resolution imaging. Finally, WinRHIZO image analysis software (V4.1c; Regent Instruments, Quebec City, QC, Canada) was used to examine root system parameters.
Measurements of leaf SPAD
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For measurements of leaf SPAD, we used a portable chlorophyll meter (SPAD-502; Minolta, Japan) according to the method of Markwell et al[35]. The results obtained from the experiment were measured in SPAD values, which is a unit used to assess the chlorophyll content in plants. The SPAD values ranged from 0 to 100, with higher values indicating that the plants had more chlorophyll content.
Determination of chlorophyll content
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Chlorophyll content was determined as described previously[36]. To measure the concentration of chlorophyll, samples of leaves were taken from hydroponic experiment at regular intervals throughout the study. The chlorophyll was extracted from the leaves using a solution of 80% ethanol, which was then analyzed using a multi-function enzyme marker meter (Victor Nivo, PerkinElmer, Waltham, MA, USA) at wavelengths of 664 and 647 nm.
Determination of nitrate reductase (NR) activity and glutamine synthetase (GS) activity
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According to the method described earlier[37], the activity of nitrate reductase was determined in roots. The definition of nitrate reductase activity is the decrease in the amount of
in the reaction mixture[38]. The activity of glutamine synthetase was analyzed by spectrophotometry[39], whereas the activity of glutamate synthase was determined according to the method of Lin & Kao[40].${\text{NO}^-_2} $ Statistical analysis
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For statistical analysis, Prism 9.4 software (GraphPad software, USA) was used with Student's t-test. Differences were considered significant if p <0.05 or 0.01.
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About this article
Cite this article
Liu Z, Ma Z, Li J, Bian N, Guo Z, et al. 2023. Interfering small ubiquitin modifiers (SUMO) exhibits apple's enhanced tolerance to nitrogen deficiency. Fruit Research 3:24 doi: 10.48130/FruRes-2023-0024
Interfering small ubiquitin modifiers (SUMO) exhibits apple's enhanced tolerance to nitrogen deficiency
- Received: 25 June 2023
- Accepted: 09 August 2023
- Published online: 08 October 2023
Abstract: Nitrogen is one of the most critical macroelements required for apple biomass accumulation and quality formation. Thus, identification and characterization of candidate genes involved in nitrogen deficiency stress is of great importance to the sustainable development of the apple industry. SUMOylation is a kind of post-translational modification, which is widely involved in plant life processes, including responses to nitrogen (N) deficiency. Here, we identified apple small ubiquitin modifiers (SUMO) that participated in responding to nitrogen deficiency. Firstly, all isoforms of apple SUMOs were induced by N deficiency stress. Under N deficiency stress conditions, the MdSUMO2 RNAi transgenic apple plants showed better growth potential than the wild type GL-3, including more new leaves, increased height, thicker stems, and heavier fresh weight. In addition, the MdSUMO2 RNAi transgenic apple plants exhibited darker green leaves and greater root volume than GL-3 in response to N deficient conditions. Finally, the activated glutamine synthetase (GS) activity, nitrate reductase (NR) activity, as well as the induced expression of genes involved in nitrogen assimilation in the root might contribute to the tolerance of MdSUMO2 RNAi transgenic apple plants in response to nitrogen deficiency. Taken together, our finding provides insight to further study the mechanisms underlying the essential roles of apple MdSUMOs in responding to N deficient conditions.
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Key words:
- Apple /
- SUMO /
- Nitrogen deficiency